BLASTX nr result

ID: Coptis24_contig00032100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032100
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322288.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
ref|XP_002318757.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
ref|XP_002322287.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53
ref|XP_002322285.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53
ref|XP_003626859.1| hypothetical protein MTR_8g011330 [Medicago ...   211   4e-53

>ref|XP_002322288.1| predicted protein [Populus trichocarpa] gi|222869284|gb|EEF06415.1|
           predicted protein [Populus trichocarpa]
          Length = 1356

 Score =  213 bits (541), Expect = 2e-53
 Identities = 101/125 (80%), Positives = 113/125 (90%), Gaps = 1/125 (0%)
 Frame = -2

Query: 374 LEFIVTSRDITGTGAPSTLLIFNNEKGFSAKNIESICSVGRSTKKGQRQLGYIGEKGIGF 195
           LEF++TSRDIT TGAP+TLLIFNNEKGFSAKNIESIC+VG STKKG R+ GYIGEKGIGF
Sbjct: 68  LEFVITSRDITNTGAPATLLIFNNEKGFSAKNIESICNVGNSTKKGNRKRGYIGEKGIGF 127

Query: 194 KSVFLITAQPYIFSNGYQIKFNEDPCPDCNLGYIVPEWVDENPTLSDIQKIYG-RDALPA 18
           KSVFLI AQPYIFSNGYQI+FNE PCP CNLGYIVPEWVD++P+LSDI++IYG    LP 
Sbjct: 128 KSVFLIAAQPYIFSNGYQIRFNEKPCPHCNLGYIVPEWVDDSPSLSDIKQIYGSASTLPT 187

Query: 17  TTIIL 3
           TT+IL
Sbjct: 188 TTLIL 192


>ref|XP_002318757.1| predicted protein [Populus trichocarpa] gi|222859430|gb|EEE96977.1|
           predicted protein [Populus trichocarpa]
          Length = 1713

 Score =  213 bits (541), Expect = 2e-53
 Identities = 101/125 (80%), Positives = 115/125 (92%), Gaps = 1/125 (0%)
 Frame = -2

Query: 374 LEFIVTSRDITGTGAPSTLLIFNNEKGFSAKNIESICSVGRSTKKGQRQLGYIGEKGIGF 195
           LEF++TSRDIT TGAP+TLL+FNNEKGFSAKNI+SICSVG STKKG R+ GYIGEKGIGF
Sbjct: 68  LEFVITSRDITNTGAPATLLMFNNEKGFSAKNIDSICSVGNSTKKGNRKRGYIGEKGIGF 127

Query: 194 KSVFLITAQPYIFSNGYQIKFNEDPCPDCNLGYIVPEWVDENPTLSDIQKIYGRDA-LPA 18
           KSVFLITAQPYIFSNGYQI+FNE+PCP CNLGYIVPEWV E+P+LSDI++IYG  + LP 
Sbjct: 128 KSVFLITAQPYIFSNGYQIRFNENPCPHCNLGYIVPEWVHESPSLSDIKQIYGSTSMLPT 187

Query: 17  TTIIL 3
           TT+IL
Sbjct: 188 TTLIL 192


>ref|XP_002322287.1| predicted protein [Populus trichocarpa] gi|222869283|gb|EEF06414.1|
           predicted protein [Populus trichocarpa]
          Length = 1467

 Score =  211 bits (538), Expect = 4e-53
 Identities = 100/125 (80%), Positives = 113/125 (90%), Gaps = 1/125 (0%)
 Frame = -2

Query: 374 LEFIVTSRDITGTGAPSTLLIFNNEKGFSAKNIESICSVGRSTKKGQRQLGYIGEKGIGF 195
           LEF++TSRDIT TGAP+TLL+FNNEKGFSAKNIESIC+VG STKKG R+ GYIGEKGIGF
Sbjct: 68  LEFVITSRDITNTGAPATLLMFNNEKGFSAKNIESICNVGNSTKKGNRKRGYIGEKGIGF 127

Query: 194 KSVFLITAQPYIFSNGYQIKFNEDPCPDCNLGYIVPEWVDENPTLSDIQKIYG-RDALPA 18
           KSVFLI AQPYIFSNGYQI+FNE PCP CNLGYIVPEWVD++P+LSDI++IYG    LP 
Sbjct: 128 KSVFLIAAQPYIFSNGYQIRFNEKPCPHCNLGYIVPEWVDDSPSLSDIKQIYGSASTLPT 187

Query: 17  TTIIL 3
           TT+IL
Sbjct: 188 TTLIL 192


>ref|XP_002322285.1| predicted protein [Populus trichocarpa] gi|222869281|gb|EEF06412.1|
           predicted protein [Populus trichocarpa]
          Length = 1692

 Score =  211 bits (538), Expect = 4e-53
 Identities = 100/125 (80%), Positives = 115/125 (92%), Gaps = 1/125 (0%)
 Frame = -2

Query: 374 LEFIVTSRDITGTGAPSTLLIFNNEKGFSAKNIESICSVGRSTKKGQRQLGYIGEKGIGF 195
           LEF++TSRDIT TGAP+TLLIFN+EKGFSAKNIESICSVG STKKG R+ GYIGEKGIGF
Sbjct: 74  LEFVITSRDITATGAPATLLIFNSEKGFSAKNIESICSVGNSTKKGNRKRGYIGEKGIGF 133

Query: 194 KSVFLITAQPYIFSNGYQIKFNEDPCPDCNLGYIVPEWVDENPTLSDIQKIYGRDA-LPA 18
           KSVFLIT QP+IFSNGYQI+FNE PCP CNLGY+VPEWV+ENP+LSDI++IYG ++ LP 
Sbjct: 134 KSVFLITPQPFIFSNGYQIRFNEKPCPLCNLGYVVPEWVEENPSLSDIKQIYGSNSTLPT 193

Query: 17  TTIIL 3
           TTI+L
Sbjct: 194 TTIVL 198


>ref|XP_003626859.1| hypothetical protein MTR_8g011330 [Medicago truncatula]
           gi|355520881|gb|AET01335.1| hypothetical protein
           MTR_8g011330 [Medicago truncatula]
          Length = 1702

 Score =  211 bits (538), Expect = 4e-53
 Identities = 100/126 (79%), Positives = 111/126 (88%), Gaps = 2/126 (1%)
 Frame = -2

Query: 374 LEFIVTSRDITGTGAPSTLLIFNNEKGFSAKNIESICSVGRSTKKGQRQLGYIGEKGIGF 195
           LEF++TS DITGTGAP+TLLIFNNEKGFS KNIESICSVGRSTKK  R  GYIGEKGIGF
Sbjct: 68  LEFVITSDDITGTGAPATLLIFNNEKGFSPKNIESICSVGRSTKKDNRSSGYIGEKGIGF 127

Query: 194 KSVFLITAQPYIFSNGYQIKFNEDPCPDCNLGYIVPEWVDENPTLSDIQKIY--GRDALP 21
           KSVFL+TAQPYIFSNGY I+FNE PCP C +GY+VPEWV+E PTL DIQKIY  G+D+LP
Sbjct: 128 KSVFLVTAQPYIFSNGYHIRFNERPCPHCRIGYVVPEWVEEKPTLVDIQKIYGAGKDSLP 187

Query: 20  ATTIIL 3
            TTI+L
Sbjct: 188 TTTIVL 193


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