BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032081
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis...    69   5e-10
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    68   2e-09
ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata sub...    64   3e-08
ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm...    62   8e-08
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1...    62   1e-07

>ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449508988|ref|XP_004163461.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 179

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
 Frame = -1

Query: 609 TEESGSDLASNFVIAFDTMSDEFRAVVQLHPDVAEDSCCIQLEVFDGCLSLLCNFDYEDF 430
           +E  G  LA + V+AFD  +  F  +    P++ +  C I ++V  GCL L+ N+D    
Sbjct: 14  SENLGMGLA-DLVVAFDLGTGRFEEIPL--PELTDFKCEIHVDVLGGCLCLIANYDR--- 67

Query: 429 VKFEVWVMKDYGLRKSWVKLYTVTGFDHPYGITNTGNFITHKLYSG---LYDPQDRSYRD 259
           V+FEVWVMK+YG+++SW+KL TV+  D    I +       K       L++ +   + D
Sbjct: 68  VRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKSVKPLTYSKTGCKVLLLHNRRKLIWYD 127

Query: 258 INVQGIHNPIVN 223
           ++ Q +H+ +++
Sbjct: 128 LDTQTVHDAVID 139


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
 Frame = -1

Query: 573 VIAFDTMSDEFRAVVQLHPDVAEDSCCI-QLEVFDGCLSLLCNFDYEDFVKFEVWVMKDY 397
           +++ D   + +R V  L PD  ++ C    L V  GCL +  N+DY+    F VW+MKDY
Sbjct: 232 IVSLDLEKETYREV--LPPDYEKEECSTPSLSVLKGCLCM--NYDYKK-TDFVVWLMKDY 286

Query: 396 GLRKSWVKLYTVT--------GFDHPYGITNTGN-FITHKLYSGLYDPQDRSYRDINVQG 244
           G+R+SW+KL T+          +  PY I+  G   +  +    LYDP+D S+R   ++G
Sbjct: 287 GVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLLMFEFDLILYDPRDHSFRYPRIEG 346


>ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318497|gb|EFH48919.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = -1

Query: 588 LASNFVIAFDTMSDEFRAVVQLHPDVAEDSCCIQLE--VFDGCLSLLCNFDYEDFVKFEV 415
           +A N ++ FD   +EF  +V+    VA  +  IQ++  V DGCL L+CN+D E     +V
Sbjct: 231 IAFNLIVRFDLALEEF-GIVRFPETVANGNVDIQMDISVLDGCLCLMCNYDQE---YVDV 286

Query: 414 WVMKDYGLRKSWVKLYTV 361
           W+MK+Y +R SW K++TV
Sbjct: 287 WMMKEYNVRSSWTKVFTV 304


>ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis]
           gi|223543892|gb|EEF45418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/77 (38%), Positives = 48/77 (62%)
 Frame = -1

Query: 573 VIAFDTMSDEFRAVVQLHPDVAEDSCCIQLEVFDGCLSLLCNFDYEDFVKFEVWVMKDYG 394
           +++FD   + ++ V+Q  PD  E      L V DGCL ++CN+     V+ + WVMK+YG
Sbjct: 180 IVSFDIKRETYKEVMQ--PDYGELVYDRTLGVLDGCLCVMCNYHA---VRADFWVMKEYG 234

Query: 393 LRKSWVKLYTVTGFDHP 343
           +R+SW++L TV   D+P
Sbjct: 235 VRESWIRLVTVPYLDYP 251


>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
           gi|145333023|ref|NP_001078377.1| F-box protein CPR30
           [Arabidopsis thaliana]
           gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
           protein CPR30; AltName: Full=Protein CONSTITUTIVE
           EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
           F-box protein CPR30 [Arabidopsis thaliana]
           gi|332657748|gb|AEE83148.1| F-box protein CPR30
           [Arabidopsis thaliana]
          Length = 413

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
 Frame = -1

Query: 588 LASNFVIAFDTMSDEFRAVVQLHPDVAEDSCCIQLE--VFDGCLSLLCNFDYEDFVKFEV 415
           +A N ++ FD   +EF  +V+    VA  +  IQ++  V DGCL L+CN+D + +V  +V
Sbjct: 230 IAFNLIVRFDLALEEFE-IVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYD-QSYV--DV 285

Query: 414 WVMKDYGLRKSWVKLYTV 361
           W+MK+Y +R SW K++TV
Sbjct: 286 WMMKEYNVRDSWTKVFTV 303