BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032075
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_003591206.1| Pentatricopeptide repeat-containing protein ...   140   1e-31
ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
gb|EAY81825.1| hypothetical protein OsI_36997 [Oryza sativa Indi...   134   1e-29

>ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Glycine max]
          Length = 483

 Score =  143 bits (360), Expect = 2e-32
 Identities = 64/92 (69%), Positives = 78/92 (84%)
 Frame = +2

Query: 2   YGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELAEHAVKKLIHLE 181
           YGC+VDLLGR G V+EA +LI  MP+ P AA+WGALLSACR +G  E+AE+A K+L+ LE
Sbjct: 379 YGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGDREIAENAAKELVRLE 438

Query: 182 PWNSGNYVLLSNIYAEQGKWDQVEKARVTMRG 277
           PWNSGNYVLLSN+YAE+G+WD+VEK RV MRG
Sbjct: 439 PWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRG 470


>ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
           gi|449490933|ref|XP_004158752.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
          Length = 484

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/93 (69%), Positives = 78/93 (83%)
 Frame = +2

Query: 2   YGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELAEHAVKKLIHLE 181
           +GCMVDLLGR GCV+EA +LIK MPM PNA +WGA+L ACR HG+L+LAE AVK+LI LE
Sbjct: 380 FGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISLE 439

Query: 182 PWNSGNYVLLSNIYAEQGKWDQVEKARVTMRGK 280
           PWNSGNYVLLSN+ AE+G+W++VE  R  MR K
Sbjct: 440 PWNSGNYVLLSNMLAEEGRWEEVENVRQWMREK 472


>ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480254|gb|AES61457.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 490

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/92 (70%), Positives = 78/92 (84%)
 Frame = +2

Query: 2   YGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELAEHAVKKLIHLE 181
           YGC+VDLLGR G VKEA +LI+ MP+MPNAA+WGALLSACR HG  E+AE A K+L+ LE
Sbjct: 381 YGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLE 440

Query: 182 PWNSGNYVLLSNIYAEQGKWDQVEKARVTMRG 277
           P NSGNYVLLSN+YAE+ KW++VEK RV M+G
Sbjct: 441 PGNSGNYVLLSNVYAEERKWNEVEKVRVLMQG 472


>ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|222871649|gb|EEF08780.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/94 (69%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   YGCMVDLLGRTGCVKEALELIKGMPM-MPNAAIWGALLSACRVHGHLELAEHAVKKLIHL 178
           YGCMVDLLGR+GCV+EA +LI+ MP   PNAA+WG+LLSACR HG +ELA  AVK+LI L
Sbjct: 380 YGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLAVKELIDL 439

Query: 179 EPWNSGNYVLLSNIYAEQGKWDQVEKARVTMRGK 280
           EPWNSGNYVLLSN+YAE+ +WD+V   R  MR K
Sbjct: 440 EPWNSGNYVLLSNMYAEEERWDKVANVRGMMREK 473


>gb|EAY81825.1| hypothetical protein OsI_36997 [Oryza sativa Indica Group]
          Length = 515

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/91 (67%), Positives = 75/91 (82%)
 Frame = +2

Query: 2   YGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELAEHAVKKLIHLE 181
           YGCMVDLLGR+G ++EA  LI+GMPM PNAAIWGALLSAC  H  + +AE A+K+LI+LE
Sbjct: 402 YGCMVDLLGRSGLLEEAYALIQGMPMRPNAAIWGALLSACHAHSGISIAEVALKELINLE 461

Query: 182 PWNSGNYVLLSNIYAEQGKWDQVEKARVTMR 274
           PWNSGNYVLL+N+YAE G+W++   AR  MR
Sbjct: 462 PWNSGNYVLLANLYAETGRWEEAGDARRLMR 492