BLASTX nr result

ID: Coptis24_contig00032064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032064
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533452.1| PREDICTED: uncharacterized protein LOC100817...    77   3e-12
emb|CAN64031.1| hypothetical protein VITISV_037889 [Vitis vinifera]    65   1e-08
ref|XP_002326561.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08
ref|XP_002303449.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07
gb|AFW66674.1| hypothetical protein ZEAMMB73_591056 [Zea mays]         57   4e-06

>ref|XP_003533452.1| PREDICTED: uncharacterized protein LOC100817091 [Glycine max]
          Length = 698

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
 Frame = -2

Query: 634 SEQLSNLEKECVYLKKDRDNKEEQLRLRNVTSSQFQNASTSFPMA-GIEAMGNHRTSSSR 458
           ++Q++NLEKE V LKK+RD KE+QL+  +  + + +NA T F  +  I+   N R     
Sbjct: 116 TKQIANLEKERVKLKKERDKKEDQLKSISSRNEE-ENACTKFSKSKSIDKGQNDR----- 169

Query: 457 PILERVSNTGINGIECIEVLSSCHQPRGGYGPKWKNVQADGVDVTTDLRRRALINSGSTE 278
                  + G + + C ++ S           K++N    GV                  
Sbjct: 170 -------DFGTHALNCHKISS-----------KFQN----GVS----------------- 190

Query: 277 RSFQKSVLPEATTQLKHTKAVGVQTET---EDGSGLLIRKNDFDSQHDLFNKLQAIWGLP 107
                 ++ E+T+     KA GV+T T   ++  G L  ++D  +  DL  KL AIWG P
Sbjct: 191 ---SNDLIVESTS-----KAKGVETATISHQEAQGALPLRDDLSAYLDLSQKLLAIWGSP 242

Query: 106 SREKAGKSLVSKLFVMCAADIYALFRCMGMSMP 8
           +  K G +++SKL V C  D   LF CM MS+P
Sbjct: 243 TDNKMGTNVISKLLVGCQRDFQVLFGCMNMSLP 275


>emb|CAN64031.1| hypothetical protein VITISV_037889 [Vitis vinifera]
          Length = 2193

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/96 (38%), Positives = 51/96 (53%)
 Frame = -2

Query: 298  INSGSTERSFQKSVLPEATTQLKHTKAVGVQTETEDGSGLLIRKNDFDSQHDLFNKLQAI 119
            +N+   E  F+        T +   KA GVQT+  D + L +  ND  +   L NKL  I
Sbjct: 2033 VNTSVNEADFR------VDTAMPTCKAKGVQTDMADSTRLTV-DNDLSAHDHLSNKLLTI 2085

Query: 118  WGLPSREKAGKSLVSKLFVMCAADIYALFRCMGMSM 11
            WG  S + +GK+LVSKL V C  D + LF C+ M+M
Sbjct: 2086 WGSQSGQISGKNLVSKLLVACETDFHVLFGCLSMNM 2121


>ref|XP_002326561.1| predicted protein [Populus trichocarpa] gi|222833883|gb|EEE72360.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = -2

Query: 226 TKAVGVQTETEDGSGLLIRKNDFDSQHDLFNKLQAIWGLPSREKAGKSLVSKLFVMCAAD 47
           +KA+GVQTE       +  KND  S  +L   L  IWG  + ++ G++L+SKLF+MC  D
Sbjct: 194 SKAIGVQTERSIDFTKVELKNDSPSHPELSETLLGIWGSTTEQQLGRNLISKLFMMCPTD 253

Query: 46  IYALFRCMGMSM 11
              LF CM M+M
Sbjct: 254 FQVLFGCMSMNM 265


>ref|XP_002303449.1| predicted protein [Populus trichocarpa] gi|222840881|gb|EEE78428.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/93 (34%), Positives = 47/93 (50%)
 Frame = -2

Query: 289 GSTERSFQKSVLPEATTQLKHTKAVGVQTETEDGSGLLIRKNDFDSQHDLFNKLQAIWGL 110
           G ++ S     L +       +KA+GVQTE       +   ND  S  +L   L  IWG 
Sbjct: 179 GISQHSKNAKPLEDQIDIASTSKAIGVQTERSIDFTKIDLNNDLSSHLELSKTLLGIWGS 238

Query: 109 PSREKAGKSLVSKLFVMCAADIYALFRCMGMSM 11
            S ++ G++++SKLF+ C  D   LF CM M+M
Sbjct: 239 TSEQQLGRNMISKLFMACLTDFQVLFGCMSMNM 271


>gb|AFW66674.1| hypothetical protein ZEAMMB73_591056 [Zea mays]
          Length = 425

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 8/210 (3%)
 Frame = -2

Query: 634 SEQLSNLEKECVYLKKDRDNKEEQLRLRNVTSSQFQNASTSFPMAGIEAMGNHRTSSSRP 455
           S++ + L+ EC  LKKDR  K+ Q++ +       + A+ S  M  + + G +   S   
Sbjct: 171 SKERNELKNECTALKKDRTKKDLQIKAKEAEIQNLKKANVS-SMKDVCSAGMNIDQSFHA 229

Query: 454 ILERVSNTGINGIECIEVL---SSCHQPRGGYGPKWKNVQADGVDVTTDLRRRALINSGS 284
                 +TG++     ++       H  R     K +  Q D ++   +LRRR +I++G 
Sbjct: 230 PANEALHTGVSSRRTDKMSGKDKDAHSLRDDLYLK-QGHQTDLLE-ALELRRRTMIDNGM 287

Query: 283 TERSF----QKSVLPEATTQLKHTKAVGVQTE-TEDGSGLLIRKNDFDSQHDLFNKLQAI 119
           +        + +         K  KA+GVQT+ T D   L  +K   +    +   L+A+
Sbjct: 288 STSGVVSLEEDTHFEPRNATCKEIKAIGVQTDNTSDNEHLDCKKLLVER---ISGNLRAM 344

Query: 118 WGLPSREKAGKSLVSKLFVMCAADIYALFR 29
           WG+     + ++L+SK+ V C+ +I +L +
Sbjct: 345 WGMSPNSLSSRNLISKINVSCSEEILSLLQ 374


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