BLASTX nr result
ID: Coptis24_contig00032052
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032052 (242 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 73 3e-11 gb|ABG22118.1| polyprotein [Hydrangea macrophylla] 72 5e-11 ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Viti... 70 1e-10 emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera] 70 1e-10 emb|CAN69344.1| hypothetical protein VITISV_006017 [Vitis vinifera] 69 5e-10 >emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] Length = 1382 Score = 72.8 bits (177), Expect = 3e-11 Identities = 36/54 (66%), Positives = 42/54 (77%) Frame = +1 Query: 79 QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240 QS Y ++I ERA LTD + VDTP+E+NARY+ DG L DPTLYRTIVG LVYL Sbjct: 1118 QSKYVANILERARLTDNKTVDTPIEVNARYSSSDGLPLIDPTLYRTIVGSLVYL 1171 >gb|ABG22118.1| polyprotein [Hydrangea macrophylla] Length = 351 Score = 72.0 bits (175), Expect = 5e-11 Identities = 34/54 (62%), Positives = 40/54 (74%) Frame = +1 Query: 79 QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240 Q+ YSSDI RAG+TD + TPLELN+ TP+DG L DPTLYR +VG LVYL Sbjct: 139 QAKYSSDILTRAGITDNKTSPTPLELNSMLTPMDGTPLNDPTLYRQLVGSLVYL 192 >ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera] Length = 1452 Score = 70.5 bits (171), Expect = 1e-10 Identities = 32/54 (59%), Positives = 42/54 (77%) Frame = +1 Query: 79 QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240 Q+ Y+SD+ +AGLTD++ VDTP+ELNA TPL G L +P+LYR +VG LVYL Sbjct: 348 QAKYASDLLSQAGLTDSKTVDTPVELNAHLTPLGGKPLSNPSLYRRLVGSLVYL 401 >emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera] Length = 1381 Score = 70.5 bits (171), Expect = 1e-10 Identities = 32/54 (59%), Positives = 42/54 (77%) Frame = +1 Query: 79 QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240 Q+ Y+SD+ +AGLTD++ VDTP+ELNA TPL G L +P+LYR +VG LVYL Sbjct: 1118 QAKYASDLLSQAGLTDSKTVDTPVELNAHLTPLGGKPLSNPSLYRRLVGSLVYL 1171 >emb|CAN69344.1| hypothetical protein VITISV_006017 [Vitis vinifera] Length = 383 Score = 68.6 bits (166), Expect = 5e-10 Identities = 31/54 (57%), Positives = 41/54 (75%) Frame = +1 Query: 79 QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240 Q+ Y+ D+ +AGLTD++ VDTP+ELNA TPL G L +P+LYR +VG LVYL Sbjct: 120 QAKYAXDLLSQAGLTDSKTVDTPVELNAHLTPLGGKPLSNPSLYRRLVGSLVYL 173