BLASTX nr result

ID: Coptis24_contig00032052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032052
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                73   3e-11
gb|ABG22118.1| polyprotein [Hydrangea macrophylla]                     72   5e-11
ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Viti...    70   1e-10
emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]    70   1e-10
emb|CAN69344.1| hypothetical protein VITISV_006017 [Vitis vinifera]    69   5e-10

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = +1

Query: 79   QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240
            QS Y ++I ERA LTD + VDTP+E+NARY+  DG  L DPTLYRTIVG LVYL
Sbjct: 1118 QSKYVANILERARLTDNKTVDTPIEVNARYSSSDGLPLIDPTLYRTIVGSLVYL 1171


>gb|ABG22118.1| polyprotein [Hydrangea macrophylla]
          Length = 351

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/54 (62%), Positives = 40/54 (74%)
 Frame = +1

Query: 79  QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240
           Q+ YSSDI  RAG+TD +   TPLELN+  TP+DG  L DPTLYR +VG LVYL
Sbjct: 139 QAKYSSDILTRAGITDNKTSPTPLELNSMLTPMDGTPLNDPTLYRQLVGSLVYL 192


>ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 1452

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/54 (59%), Positives = 42/54 (77%)
 Frame = +1

Query: 79  QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240
           Q+ Y+SD+  +AGLTD++ VDTP+ELNA  TPL G  L +P+LYR +VG LVYL
Sbjct: 348 QAKYASDLLSQAGLTDSKTVDTPVELNAHLTPLGGKPLSNPSLYRRLVGSLVYL 401


>emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
          Length = 1381

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/54 (59%), Positives = 42/54 (77%)
 Frame = +1

Query: 79   QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240
            Q+ Y+SD+  +AGLTD++ VDTP+ELNA  TPL G  L +P+LYR +VG LVYL
Sbjct: 1118 QAKYASDLLSQAGLTDSKTVDTPVELNAHLTPLGGKPLSNPSLYRRLVGSLVYL 1171


>emb|CAN69344.1| hypothetical protein VITISV_006017 [Vitis vinifera]
          Length = 383

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = +1

Query: 79  QSNYSSDIYERAGLTDTRIVDTPLELNARYTPLDGDSLPDPTLYRTIVGGLVYL 240
           Q+ Y+ D+  +AGLTD++ VDTP+ELNA  TPL G  L +P+LYR +VG LVYL
Sbjct: 120 QAKYAXDLLSQAGLTDSKTVDTPVELNAHLTPLGGKPLSNPSLYRRLVGSLVYL 173


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