BLASTX nr result

ID: Coptis24_contig00032044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032044
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552940.1| PREDICTED: LRR repeats and ubiquitin-like do...   111   7e-23
gb|AFK42552.1| unknown [Lotus japonicus]                              109   3e-22
ref|XP_002298494.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
gb|ABK95593.1| unknown [Populus trichocarpa]                          108   4e-22
gb|AFK47174.1| unknown [Medicago truncatula]                          107   1e-21

>ref|XP_003552940.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like [Glycine max]
          Length = 375

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/65 (80%), Positives = 58/65 (89%)
 Frame = -2

Query: 365 SLPSTLFKLCLKLSTLDLHNTEITMDLLRQFEGWEDFDERRRSKLQKQLDFSIGCSEGFD 186
           SLPS LFK CL+LSTLDLHNTEIT+DLLRQFEGW++FDERRRSK QKQ+DF +G S  FD
Sbjct: 310 SLPSKLFKTCLQLSTLDLHNTEITIDLLRQFEGWDNFDERRRSKHQKQIDFRVGVSRDFD 369

Query: 185 EGADK 171
           EGADK
Sbjct: 370 EGADK 374


>gb|AFK42552.1| unknown [Lotus japonicus]
          Length = 378

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = -2

Query: 365 SLPSTLFKLCLKLSTLDLHNTEITMDLLRQFEGWEDFDERRRSKLQKQLDFSIGCSEGFD 186
           SLPS LFK CL+LSTLDLHNTEIT+D+LRQ+EGW +FDERRRSK QKQLDF +G S  FD
Sbjct: 313 SLPSKLFKTCLQLSTLDLHNTEITIDILRQYEGWSNFDERRRSKHQKQLDFRVGVSRDFD 372

Query: 185 EGADK 171
           EGADK
Sbjct: 373 EGADK 377


>ref|XP_002298494.1| predicted protein [Populus trichocarpa] gi|222845752|gb|EEE83299.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/65 (78%), Positives = 58/65 (89%)
 Frame = -2

Query: 365 SLPSTLFKLCLKLSTLDLHNTEITMDLLRQFEGWEDFDERRRSKLQKQLDFSIGCSEGFD 186
           SLPST+FK+CL+LSTLDLHNTEITMD+LRQ EGW+DFD+RRRSK QKQLDF +  S  FD
Sbjct: 306 SLPSTIFKMCLQLSTLDLHNTEITMDVLRQLEGWQDFDDRRRSKHQKQLDFRVVGSAEFD 365

Query: 185 EGADK 171
           EGADK
Sbjct: 366 EGADK 370


>gb|ABK95593.1| unknown [Populus trichocarpa]
          Length = 371

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/65 (78%), Positives = 58/65 (89%)
 Frame = -2

Query: 365 SLPSTLFKLCLKLSTLDLHNTEITMDLLRQFEGWEDFDERRRSKLQKQLDFSIGCSEGFD 186
           SLPST+FK+CL+LSTLDLHNTEITMD+LRQ EGW+DFD+RRRSK QKQLDF +  S  FD
Sbjct: 306 SLPSTIFKMCLQLSTLDLHNTEITMDVLRQLEGWQDFDDRRRSKHQKQLDFRVVGSAEFD 365

Query: 185 EGADK 171
           EGADK
Sbjct: 366 EGADK 370


>gb|AFK47174.1| unknown [Medicago truncatula]
          Length = 372

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/65 (75%), Positives = 57/65 (87%)
 Frame = -2

Query: 365 SLPSTLFKLCLKLSTLDLHNTEITMDLLRQFEGWEDFDERRRSKLQKQLDFSIGCSEGFD 186
           SLPS LFK CL+LSTLDLHNTEIT+D+LR+FEGW+ FDERRRSK QKQ++F +G S  FD
Sbjct: 307 SLPSKLFKTCLQLSTLDLHNTEITIDILREFEGWDSFDERRRSKHQKQIEFRVGVSRDFD 366

Query: 185 EGADK 171
           EGADK
Sbjct: 367 EGADK 371


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