BLASTX nr result

ID: Coptis24_contig00032038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032038
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1...   127   7e-28
ref|XP_003542136.1| PREDICTED: ABC transporter C family member 1...   120   2e-25
emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...   111   5e-23
gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]             108   6e-22
ref|XP_002512723.1| multidrug resistance-associated protein, put...   107   1e-21

>ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera]
          Length = 1305

 Score =  127 bits (320), Expect = 7e-28
 Identities = 56/87 (64%), Positives = 69/87 (79%)
 Frame = +1

Query: 37  SYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNPSHPS 216
           SYWH+LTFK +  VM+ G  KQLDF+DL+QLPI+++PSSC +TLLSCW  ++  N S+PS
Sbjct: 52  SYWHLLTFKAITSVMNHGVVKQLDFEDLLQLPIDMDPSSCHATLLSCWHAQQRHNCSNPS 111

Query: 217 LLKAICYAYGWPYLFLGLLKVFNDCFG 297
           L +AIC AYGWPY  LGLLKV NDC G
Sbjct: 112 LFRAICCAYGWPYFRLGLLKVVNDCIG 138


>ref|XP_003542136.1| PREDICTED: ABC transporter C family member 13-like [Glycine max]
          Length = 1384

 Score =  120 bits (300), Expect = 2e-25
 Identities = 53/96 (55%), Positives = 70/96 (72%)
 Frame = +1

Query: 10  HRDLNINALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETE 189
           + DL  N  ++W ++TFKF+ PVM+ G  KQLD +DL+ LP ++ PSSC   +LSCW+ +
Sbjct: 125 YNDLGNNG-NFWDLMTFKFITPVMNHGVIKQLDPEDLLPLPTDIGPSSCHDVILSCWQAQ 183

Query: 190 ESKNPSHPSLLKAICYAYGWPYLFLGLLKVFNDCFG 297
            S N S+PSL +A+C AYGWPYL LGLLKV NDC G
Sbjct: 184 LSNNDSNPSLFRALCSAYGWPYLCLGLLKVINDCIG 219


>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score =  111 bits (278), Expect = 5e-23
 Identities = 47/87 (54%), Positives = 66/87 (75%)
 Frame = +1

Query: 31  ALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNPSH 210
           A + W I+TFK ++ VM+ G ++QLDF+DL+QLP +++ S C++ L  CWE ++  N S+
Sbjct: 211 ANNLWRIITFKSIDSVMENGVKRQLDFNDLLQLPEDMDSSCCYNLLQHCWEAQQRNNNSN 270

Query: 211 PSLLKAICYAYGWPYLFLGLLKVFNDC 291
           PSLLKA+C AYGWPY  +GLLKV NDC
Sbjct: 271 PSLLKAVCCAYGWPYFRIGLLKVINDC 297


>gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]
          Length = 296

 Score =  108 bits (269), Expect = 6e-22
 Identities = 46/86 (53%), Positives = 65/86 (75%)
 Frame = +1

Query: 31  ALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNPSH 210
           A + W I+TFK ++ VM+ G ++QLDF+DL+QLP +++ S C++ L  CWE ++  N S+
Sbjct: 211 ANNLWRIITFKSIDSVMENGVKRQLDFNDLLQLPEDMDSSCCYNLLQHCWEAQQRNNNSN 270

Query: 211 PSLLKAICYAYGWPYLFLGLLKVFND 288
           PSLLKA+C AYGWPY  +GLLKV ND
Sbjct: 271 PSLLKAVCCAYGWPYFRIGLLKVIND 296


>ref|XP_002512723.1| multidrug resistance-associated protein, putative [Ricinus
           communis] gi|223547734|gb|EEF49226.1| multidrug
           resistance-associated protein, putative [Ricinus
           communis]
          Length = 1395

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/90 (54%), Positives = 63/90 (70%)
 Frame = +1

Query: 28  NALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNPS 207
           N  S W+++TFK + PVM  G  KQLDF+DL+ LP ++ P SC   L  CW+ +++   S
Sbjct: 145 NIQSCWNLMTFKSITPVMKRGIIKQLDFEDLLGLPDDMEPLSCHDRLSCCWQAQQTS--S 202

Query: 208 HPSLLKAICYAYGWPYLFLGLLKVFNDCFG 297
           +P LLKAIC AYGWPY  +GLLKVFNDC G
Sbjct: 203 NPLLLKAICCAYGWPYFRIGLLKVFNDCIG 232


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