BLASTX nr result
ID: Coptis24_contig00032038
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032038 (297 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1... 127 7e-28 ref|XP_003542136.1| PREDICTED: ABC transporter C family member 1... 120 2e-25 emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha... 111 5e-23 gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus] 108 6e-22 ref|XP_002512723.1| multidrug resistance-associated protein, put... 107 1e-21 >ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera] Length = 1305 Score = 127 bits (320), Expect = 7e-28 Identities = 56/87 (64%), Positives = 69/87 (79%) Frame = +1 Query: 37 SYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNPSHPS 216 SYWH+LTFK + VM+ G KQLDF+DL+QLPI+++PSSC +TLLSCW ++ N S+PS Sbjct: 52 SYWHLLTFKAITSVMNHGVVKQLDFEDLLQLPIDMDPSSCHATLLSCWHAQQRHNCSNPS 111 Query: 217 LLKAICYAYGWPYLFLGLLKVFNDCFG 297 L +AIC AYGWPY LGLLKV NDC G Sbjct: 112 LFRAICCAYGWPYFRLGLLKVVNDCIG 138 >ref|XP_003542136.1| PREDICTED: ABC transporter C family member 13-like [Glycine max] Length = 1384 Score = 120 bits (300), Expect = 2e-25 Identities = 53/96 (55%), Positives = 70/96 (72%) Frame = +1 Query: 10 HRDLNINALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETE 189 + DL N ++W ++TFKF+ PVM+ G KQLD +DL+ LP ++ PSSC +LSCW+ + Sbjct: 125 YNDLGNNG-NFWDLMTFKFITPVMNHGVIKQLDPEDLLPLPTDIGPSSCHDVILSCWQAQ 183 Query: 190 ESKNPSHPSLLKAICYAYGWPYLFLGLLKVFNDCFG 297 S N S+PSL +A+C AYGWPYL LGLLKV NDC G Sbjct: 184 LSNNDSNPSLFRALCSAYGWPYLCLGLLKVINDCIG 219 >emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus] Length = 1457 Score = 111 bits (278), Expect = 5e-23 Identities = 47/87 (54%), Positives = 66/87 (75%) Frame = +1 Query: 31 ALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNPSH 210 A + W I+TFK ++ VM+ G ++QLDF+DL+QLP +++ S C++ L CWE ++ N S+ Sbjct: 211 ANNLWRIITFKSIDSVMENGVKRQLDFNDLLQLPEDMDSSCCYNLLQHCWEAQQRNNNSN 270 Query: 211 PSLLKAICYAYGWPYLFLGLLKVFNDC 291 PSLLKA+C AYGWPY +GLLKV NDC Sbjct: 271 PSLLKAVCCAYGWPYFRIGLLKVINDC 297 >gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus] Length = 296 Score = 108 bits (269), Expect = 6e-22 Identities = 46/86 (53%), Positives = 65/86 (75%) Frame = +1 Query: 31 ALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNPSH 210 A + W I+TFK ++ VM+ G ++QLDF+DL+QLP +++ S C++ L CWE ++ N S+ Sbjct: 211 ANNLWRIITFKSIDSVMENGVKRQLDFNDLLQLPEDMDSSCCYNLLQHCWEAQQRNNNSN 270 Query: 211 PSLLKAICYAYGWPYLFLGLLKVFND 288 PSLLKA+C AYGWPY +GLLKV ND Sbjct: 271 PSLLKAVCCAYGWPYFRIGLLKVIND 296 >ref|XP_002512723.1| multidrug resistance-associated protein, putative [Ricinus communis] gi|223547734|gb|EEF49226.1| multidrug resistance-associated protein, putative [Ricinus communis] Length = 1395 Score = 107 bits (267), Expect = 1e-21 Identities = 49/90 (54%), Positives = 63/90 (70%) Frame = +1 Query: 28 NALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNPS 207 N S W+++TFK + PVM G KQLDF+DL+ LP ++ P SC L CW+ +++ S Sbjct: 145 NIQSCWNLMTFKSITPVMKRGIIKQLDFEDLLGLPDDMEPLSCHDRLSCCWQAQQTS--S 202 Query: 208 HPSLLKAICYAYGWPYLFLGLLKVFNDCFG 297 +P LLKAIC AYGWPY +GLLKVFNDC G Sbjct: 203 NPLLLKAICCAYGWPYFRIGLLKVFNDCIG 232