BLASTX nr result

ID: Coptis24_contig00032037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032037
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283875.1| PREDICTED: uncharacterized protein LOC100246...   167   1e-39
ref|XP_002305164.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
emb|CAN71965.1| hypothetical protein VITISV_017398 [Vitis vinifera]   158   7e-37
ref|XP_002521222.1| conserved hypothetical protein [Ricinus comm...   148   5e-34
gb|ADH82117.1| neoxanthin synthase [Citrus sinensis]                  139   4e-31

>ref|XP_002283875.1| PREDICTED: uncharacterized protein LOC100246370 [Vitis vinifera]
           gi|296087274|emb|CBI33648.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  167 bits (422), Expect = 1e-39
 Identities = 91/162 (56%), Positives = 109/162 (67%)
 Frame = +3

Query: 81  TSTFCLQSHFSLKISQSWKAMPADFTLRQEQRSISNLGGTRAEVFGQRVARLGTVVSNEW 260
           +S FC QS  S KI +S  A+      R++QRS   L G   E+FGQ+VAR G + S+EW
Sbjct: 4   SSCFC-QSQISFKIDRSAVAIRPQCHTRKDQRSTFALKGMSTELFGQQVARAGAMRSSEW 62

Query: 261 SFLGGSRIILHQKVARSVPNGKASGVNASWFTSSQIANNAFTLGTVAVLPFYTFMVLAPK 440
           SF+ GSRII+  KVAR V   K SGV ASW  + QIA++ FTLGT AVLPFYT MVLAP 
Sbjct: 63  SFMRGSRIIIRPKVARFVFYRKGSGVYASWLANPQIASSVFTLGTAAVLPFYTLMVLAPT 122

Query: 441 AELTKKSMESVIPYIVXXXXXXXXXXXSWAPDTLQMMFASKY 566
           AELTKKSMES IPY+V           SW PDT+++MFASKY
Sbjct: 123 AELTKKSMESTIPYVVLGLLYAYLLYLSWTPDTIRLMFASKY 164


>ref|XP_002305164.1| predicted protein [Populus trichocarpa] gi|222848128|gb|EEE85675.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  161 bits (408), Expect = 6e-38
 Identities = 84/162 (51%), Positives = 111/162 (68%)
 Frame = +3

Query: 81  TSTFCLQSHFSLKISQSWKAMPADFTLRQEQRSISNLGGTRAEVFGQRVARLGTVVSNEW 260
           +S FC    FSLK   S   + +   + ++++  S+L     E+FGQRVAR+G  +  +W
Sbjct: 4   SSCFCYPQ-FSLKNDCSGLTIRSHHIVGKDRKLFSSLRSNSIELFGQRVARVGADLHRDW 62

Query: 261 SFLGGSRIILHQKVARSVPNGKASGVNASWFTSSQIANNAFTLGTVAVLPFYTFMVLAPK 440
           +FLGGSRII+H K+   +   K+SGVNASW TSSQIA++ FTLGT AVLPFYT MV+APK
Sbjct: 63  NFLGGSRIIVHPKLTNFLVYRKSSGVNASWLTSSQIASSVFTLGTAAVLPFYTLMVVAPK 122

Query: 441 AELTKKSMESVIPYIVXXXXXXXXXXXSWAPDTLQMMFASKY 566
           AE+T+KSMES IPYIV           SW PDT+++MFAS+Y
Sbjct: 123 AEVTRKSMESSIPYIVLGLLYAFLLYLSWTPDTMRLMFASQY 164


>emb|CAN71965.1| hypothetical protein VITISV_017398 [Vitis vinifera]
          Length = 172

 Score =  158 bits (399), Expect = 7e-37
 Identities = 85/151 (56%), Positives = 102/151 (67%)
 Frame = +3

Query: 114 LKISQSWKAMPADFTLRQEQRSISNLGGTRAEVFGQRVARLGTVVSNEWSFLGGSRIILH 293
           L I +S  A+      R++QRS   L G   E+FGQ+VAR G + S+EWSF+ GSRII+ 
Sbjct: 14  LLIDRSAVAIRPQCHTRKDQRSTFALKGMSTELFGQQVARAGAMRSSEWSFMRGSRIIIR 73

Query: 294 QKVARSVPNGKASGVNASWFTSSQIANNAFTLGTVAVLPFYTFMVLAPKAELTKKSMESV 473
            KVAR V   K SGV ASW  + QIA++ FTLGT AVLPFYT MVLAP AELTKKSMES 
Sbjct: 74  PKVARFVFYRKGSGVYASWLANPQIASSVFTLGTAAVLPFYTLMVLAPTAELTKKSMEST 133

Query: 474 IPYIVXXXXXXXXXXXSWAPDTLQMMFASKY 566
           IPY+V           SW PDT+++MFASKY
Sbjct: 134 IPYVVLGLLYAYLLYLSWTPDTIRLMFASKY 164


>ref|XP_002521222.1| conserved hypothetical protein [Ricinus communis]
           gi|223539587|gb|EEF41174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score =  148 bits (374), Expect = 5e-34
 Identities = 76/162 (46%), Positives = 107/162 (66%)
 Frame = +3

Query: 81  TSTFCLQSHFSLKISQSWKAMPADFTLRQEQRSISNLGGTRAEVFGQRVARLGTVVSNEW 260
           +S FC  SH  LK     + +     + ++ +   +L     E+ G++VA+LG  + ++W
Sbjct: 4   SSCFC-PSHIHLKTGYPRRVIRPGRPVEKDGQKFFSLRSNSTELSGRQVAKLGADLLSDW 62

Query: 261 SFLGGSRIILHQKVARSVPNGKASGVNASWFTSSQIANNAFTLGTVAVLPFYTFMVLAPK 440
           SF+GGSRI +  K+AR++   K SGV+ASW +S Q+A+ AFTLGT AVLPFYT MV+APK
Sbjct: 63  SFIGGSRIAIRPKLARAIVYRKHSGVHASWLSSYQLASTAFTLGTAAVLPFYTLMVVAPK 122

Query: 441 AELTKKSMESVIPYIVXXXXXXXXXXXSWAPDTLQMMFASKY 566
           AELT+KSMES IPY+V           SW PDT+++MFAS+Y
Sbjct: 123 AELTRKSMESSIPYVVLGVLYAYLLYLSWTPDTVRLMFASQY 164


>gb|ADH82117.1| neoxanthin synthase [Citrus sinensis]
          Length = 248

 Score =  139 bits (349), Expect = 4e-31
 Identities = 67/133 (50%), Positives = 88/133 (66%)
 Frame = +3

Query: 168 EQRSISNLGGTRAEVFGQRVARLGTVVSNEWSFLGGSRIILHQKVARSVPNGKASGVNAS 347
           +QR  S      AE FG+++  +GT + +EWSFLGGSR+I+  +V + + + K   ++AS
Sbjct: 41  DQRLTSAPRSMNAETFGRQITGVGTDLQSEWSFLGGSRVIIRPQVTKFIRHQKGFHIHAS 100

Query: 348 WFTSSQIANNAFTLGTVAVLPFYTFMVLAPKAELTKKSMESVIPYIVXXXXXXXXXXXSW 527
           W +  Q+ +  FTLGT  VLPFYT MV APKAELTKKSMES IPY+V           SW
Sbjct: 101 WLSGPQLVSTVFTLGTAGVLPFYTLMVFAPKAELTKKSMESSIPYVVLGVLYAYLLYLSW 160

Query: 528 APDTLQMMFASKY 566
            PDTL++MFASKY
Sbjct: 161 TPDTLRLMFASKY 173


Top