BLASTX nr result

ID: Coptis24_contig00032008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032008
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   117   1e-24
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              117   1e-24
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]   117   1e-24
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002516947.1| conserved hypothetical protein [Ricinus comm...    92   6e-17

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
            [Vitis vinifera]
          Length = 1427

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/104 (53%), Positives = 75/104 (72%)
 Frame = -3

Query: 315  FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136
            F L  SL QIK+F  + KDDPL  LIYG+++ LG PLLK++WLLKS PKL+ + KK+  K
Sbjct: 857  FVLNVSLHQIKSFTVLGKDDPLKTLIYGEIEMLGPPLLKLIWLLKSEPKLEADQKKKEGK 916

Query: 135  GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4
            G+K VEDR E    +L+CL+ELI + L  P  T L+EDL+S+S+
Sbjct: 917  GRKDVEDRKEHLHLALVCLKELIKICLQNPHQTSLLEDLVSLST 960


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/104 (53%), Positives = 75/104 (72%)
 Frame = -3

Query: 315  FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136
            F L  SL QIK+F  + KDDPL  LIYG+++ LG PLLK++WLLKS PKL+ + KK+  K
Sbjct: 825  FVLNVSLHQIKSFTVLGKDDPLKTLIYGEIEMLGPPLLKLIWLLKSEPKLEADQKKKEGK 884

Query: 135  GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4
            G+K VEDR E    +L+CL+ELI + L  P  T L+EDL+S+S+
Sbjct: 885  GRKDVEDRKEHLHLALVCLKELIKICLQNPHQTSLLEDLVSLST 928


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/104 (53%), Positives = 75/104 (72%)
 Frame = -3

Query: 315  FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136
            F L  SL QIK+F  + KDDPL  LIYG+++ LG PLLK++WLLKS PKL+ + KK+  K
Sbjct: 867  FVLNVSLHQIKSFTVLGKDDPLKTLIYGEIEMLGPPLLKLIWLLKSEPKLEADQKKKEGK 926

Query: 135  GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4
            G+K VEDR E    +L+CL+ELI + L  P  T L+EDL+S+S+
Sbjct: 927  GRKDVEDRKEHLHLALVCLKELIKICLQNPHQTSLLEDLVSLST 970


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/104 (47%), Positives = 74/104 (71%)
 Frame = -3

Query: 315  FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136
            F L  SL  IK++ ++AK++PL  LIYG++K +G PLLK+++LLKS  KL T+ KK+  +
Sbjct: 879  FILNHSLHHIKSYQTVAKENPLRTLIYGEIKLMGPPLLKLIFLLKSGKKLVTDEKKKEKR 938

Query: 135  GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4
             K   EDR      +L+C++EL+ +SL  P LTGL+EDL+S+S+
Sbjct: 939  IKD--EDRKGYLHLALLCMKELVTISLQNPHLTGLLEDLVSVST 980


>ref|XP_002516947.1| conserved hypothetical protein [Ricinus communis]
            gi|223544035|gb|EEF45561.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1357

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/104 (45%), Positives = 70/104 (67%)
 Frame = -3

Query: 315  FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136
            F L +SL  I+++ +  K+DP+  LIYG++K +  PLLK++ LL S PK  T++KK   K
Sbjct: 828  FVLNSSLHHIRSYATGRKEDPIKNLIYGEIKLMAPPLLKLICLLNSGPKFATDHKKE-MK 886

Query: 135  GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4
            GK   EDR E    +L+CL+ELI +SL     +GL+EDL+S+S+
Sbjct: 887  GKNDFEDRKEHLHLALLCLKELIAISLKNSNSSGLLEDLLSVST 930