BLASTX nr result
ID: Coptis24_contig00032008
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032008 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem... 117 1e-24 emb|CBI22982.3| unnamed protein product [Vitis vinifera] 117 1e-24 emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera] 117 1e-24 ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2... 94 1e-17 ref|XP_002516947.1| conserved hypothetical protein [Ricinus comm... 92 6e-17 >ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like [Vitis vinifera] Length = 1427 Score = 117 bits (292), Expect = 1e-24 Identities = 56/104 (53%), Positives = 75/104 (72%) Frame = -3 Query: 315 FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136 F L SL QIK+F + KDDPL LIYG+++ LG PLLK++WLLKS PKL+ + KK+ K Sbjct: 857 FVLNVSLHQIKSFTVLGKDDPLKTLIYGEIEMLGPPLLKLIWLLKSEPKLEADQKKKEGK 916 Query: 135 GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4 G+K VEDR E +L+CL+ELI + L P T L+EDL+S+S+ Sbjct: 917 GRKDVEDRKEHLHLALVCLKELIKICLQNPHQTSLLEDLVSLST 960 >emb|CBI22982.3| unnamed protein product [Vitis vinifera] Length = 1361 Score = 117 bits (292), Expect = 1e-24 Identities = 56/104 (53%), Positives = 75/104 (72%) Frame = -3 Query: 315 FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136 F L SL QIK+F + KDDPL LIYG+++ LG PLLK++WLLKS PKL+ + KK+ K Sbjct: 825 FVLNVSLHQIKSFTVLGKDDPLKTLIYGEIEMLGPPLLKLIWLLKSEPKLEADQKKKEGK 884 Query: 135 GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4 G+K VEDR E +L+CL+ELI + L P T L+EDL+S+S+ Sbjct: 885 GRKDVEDRKEHLHLALVCLKELIKICLQNPHQTSLLEDLVSLST 928 >emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera] Length = 1413 Score = 117 bits (292), Expect = 1e-24 Identities = 56/104 (53%), Positives = 75/104 (72%) Frame = -3 Query: 315 FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136 F L SL QIK+F + KDDPL LIYG+++ LG PLLK++WLLKS PKL+ + KK+ K Sbjct: 867 FVLNVSLHQIKSFTVLGKDDPLKTLIYGEIEMLGPPLLKLIWLLKSEPKLEADQKKKEGK 926 Query: 135 GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4 G+K VEDR E +L+CL+ELI + L P T L+EDL+S+S+ Sbjct: 927 GRKDVEDRKEHLHLALVCLKELIKICLQNPHQTSLLEDLVSLST 970 >ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1| predicted protein [Populus trichocarpa] Length = 1406 Score = 94.0 bits (232), Expect = 1e-17 Identities = 49/104 (47%), Positives = 74/104 (71%) Frame = -3 Query: 315 FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136 F L SL IK++ ++AK++PL LIYG++K +G PLLK+++LLKS KL T+ KK+ + Sbjct: 879 FILNHSLHHIKSYQTVAKENPLRTLIYGEIKLMGPPLLKLIFLLKSGKKLVTDEKKKEKR 938 Query: 135 GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4 K EDR +L+C++EL+ +SL P LTGL+EDL+S+S+ Sbjct: 939 IKD--EDRKGYLHLALLCMKELVTISLQNPHLTGLLEDLVSVST 980 >ref|XP_002516947.1| conserved hypothetical protein [Ricinus communis] gi|223544035|gb|EEF45561.1| conserved hypothetical protein [Ricinus communis] Length = 1357 Score = 91.7 bits (226), Expect = 6e-17 Identities = 47/104 (45%), Positives = 70/104 (67%) Frame = -3 Query: 315 FALKASLCQIKTFPSMAKDDPLMPLIYGDLKQLGRPLLKMVWLLKSRPKLDTNYKKRATK 136 F L +SL I+++ + K+DP+ LIYG++K + PLLK++ LL S PK T++KK K Sbjct: 828 FVLNSSLHHIRSYATGRKEDPIKNLIYGEIKLMAPPLLKLICLLNSGPKFATDHKKE-MK 886 Query: 135 GKKGVEDRGEMFFKSLICLRELIGLSLHTPQLTGLIEDLMSMSS 4 GK EDR E +L+CL+ELI +SL +GL+EDL+S+S+ Sbjct: 887 GKNDFEDRKEHLHLALLCLKELIAISLKNSNSSGLLEDLLSVST 930