BLASTX nr result
ID: Coptis24_contig00032003
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032003 (469 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261... 63 2e-08 ref|XP_003537382.1| PREDICTED: uncharacterized protein LOC100808... 63 3e-08 emb|CAN74994.1| hypothetical protein VITISV_036840 [Vitis vinifera] 61 1e-07 ref|XP_002520404.1| conserved hypothetical protein [Ricinus comm... 60 2e-07 emb|CBI40561.3| unnamed protein product [Vitis vinifera] 59 4e-07 >ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera] Length = 1199 Score = 63.2 bits (152), Expect = 2e-08 Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 3/68 (4%) Frame = -3 Query: 197 QGKAAATVEHVTKTNGNEGIKRETG---LYSDKIEMSTPSKGGALWDIFRRQDVPKLEQY 27 Q A EH+ G +G K+ +G + +++ P++GGALWDIFRRQDVPKL++Y Sbjct: 1011 QHSAQDQEEHLEDKVGQDGSKKISGPSAISGNRLAGGKPAEGGALWDIFRRQDVPKLQEY 1070 Query: 26 LREHSREF 3 L++H R+F Sbjct: 1071 LKKHFRQF 1078 >ref|XP_003537382.1| PREDICTED: uncharacterized protein LOC100808936 [Glycine max] Length = 1106 Score = 62.8 bits (151), Expect = 3e-08 Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 9/124 (7%) Frame = -3 Query: 347 DNIEMITQSKENDAISG---TKDRPRSKVDEVFSFIHQDLDRKDKDPEFLSVEQGKAAAT 177 +N EMI + N I K + + + L KD + +VE+ K + T Sbjct: 859 ENGEMINSEERNAIIEREIVVKSSHDLDLKSELNALSSKLQIGKKDWKEENVEEVKKSNT 918 Query: 176 VEHVTKTNGNEGIKRETGLYSDKIEMSTP------SKGGALWDIFRRQDVPKLEQYLREH 15 V V T+ NE +++ G S ++ +KGGA+WDIFRRQDV +LE+YL+++ Sbjct: 919 VSSVVHTSMNEAPQQDAGYISQPVDSGNMDSGQEFAKGGAVWDIFRRQDVHRLEEYLKKY 978 Query: 14 SREF 3 REF Sbjct: 979 CREF 982 >emb|CAN74994.1| hypothetical protein VITISV_036840 [Vitis vinifera] Length = 974 Score = 60.8 bits (146), Expect = 1e-07 Identities = 39/113 (34%), Positives = 52/113 (46%) Frame = -3 Query: 341 IEMITQSKENDAISGTKDRPRSKVDEVFSFIHQDLDRKDKDPEFLSVEQGKAAATVEHVT 162 I T+S+ K + +VD VFS IH + + EF +H+ Sbjct: 815 ITSTTESENGRGAKVEKSERQDEVDAVFSDIHSSTNEVLQQGEFSD----------DHMA 864 Query: 161 KTNGNEGIKRETGLYSDKIEMSTPSKGGALWDIFRRQDVPKLEQYLREHSREF 3 N G +E G GA+WDIFRRQDVPKL++YLR+H REF Sbjct: 865 SGNKLVGFDKEGG--------------GAVWDIFRRQDVPKLQEYLRKHHREF 903 >ref|XP_002520404.1| conserved hypothetical protein [Ricinus communis] gi|223540389|gb|EEF41959.1| conserved hypothetical protein [Ricinus communis] Length = 1099 Score = 59.7 bits (143), Expect = 2e-07 Identities = 24/34 (70%), Positives = 30/34 (88%) Frame = -3 Query: 104 EMSTPSKGGALWDIFRRQDVPKLEQYLREHSREF 3 EM P +GGA+WDIFRRQDVPKL++YL+EH +EF Sbjct: 954 EMEKPDEGGAVWDIFRRQDVPKLQEYLKEHFKEF 987 >emb|CBI40561.3| unnamed protein product [Vitis vinifera] Length = 897 Score = 58.9 bits (141), Expect = 4e-07 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 12/100 (12%) Frame = -3 Query: 266 EVFSFIHQDLDRKDK--DPEFLSVEQGKAAATVEHVTKTNGNEGIKRETGLYSDK----- 108 E++ I + +D + + + L EQ K+ ++ +T E + GL S Sbjct: 671 ELYGGISEAVDESENIVEKDHLLPEQKKSKDQLDEDNETMAEEDASNQDGLNSSSDTTTN 730 Query: 107 -----IEMSTPSKGGALWDIFRRQDVPKLEQYLREHSREF 3 I+ ST GGA+WDIFRRQDVPKL +YL++H +EF Sbjct: 731 DSLQNIDDSTVVHGGAVWDIFRRQDVPKLIEYLQKHQKEF 770