BLASTX nr result

ID: Coptis24_contig00032003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032003
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...    63   2e-08
ref|XP_003537382.1| PREDICTED: uncharacterized protein LOC100808...    63   3e-08
emb|CAN74994.1| hypothetical protein VITISV_036840 [Vitis vinifera]    61   1e-07
ref|XP_002520404.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
emb|CBI40561.3| unnamed protein product [Vitis vinifera]               59   4e-07

>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
 Frame = -3

Query: 197  QGKAAATVEHVTKTNGNEGIKRETG---LYSDKIEMSTPSKGGALWDIFRRQDVPKLEQY 27
            Q  A    EH+    G +G K+ +G   +  +++    P++GGALWDIFRRQDVPKL++Y
Sbjct: 1011 QHSAQDQEEHLEDKVGQDGSKKISGPSAISGNRLAGGKPAEGGALWDIFRRQDVPKLQEY 1070

Query: 26   LREHSREF 3
            L++H R+F
Sbjct: 1071 LKKHFRQF 1078


>ref|XP_003537382.1| PREDICTED: uncharacterized protein LOC100808936 [Glycine max]
          Length = 1106

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
 Frame = -3

Query: 347  DNIEMITQSKENDAISG---TKDRPRSKVDEVFSFIHQDLDRKDKDPEFLSVEQGKAAAT 177
            +N EMI   + N  I      K      +    + +   L    KD +  +VE+ K + T
Sbjct: 859  ENGEMINSEERNAIIEREIVVKSSHDLDLKSELNALSSKLQIGKKDWKEENVEEVKKSNT 918

Query: 176  VEHVTKTNGNEGIKRETGLYSDKIEMSTP------SKGGALWDIFRRQDVPKLEQYLREH 15
            V  V  T+ NE  +++ G  S  ++          +KGGA+WDIFRRQDV +LE+YL+++
Sbjct: 919  VSSVVHTSMNEAPQQDAGYISQPVDSGNMDSGQEFAKGGAVWDIFRRQDVHRLEEYLKKY 978

Query: 14   SREF 3
             REF
Sbjct: 979  CREF 982


>emb|CAN74994.1| hypothetical protein VITISV_036840 [Vitis vinifera]
          Length = 974

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/113 (34%), Positives = 52/113 (46%)
 Frame = -3

Query: 341  IEMITQSKENDAISGTKDRPRSKVDEVFSFIHQDLDRKDKDPEFLSVEQGKAAATVEHVT 162
            I   T+S+        K   + +VD VFS IH   +   +  EF            +H+ 
Sbjct: 815  ITSTTESENGRGAKVEKSERQDEVDAVFSDIHSSTNEVLQQGEFSD----------DHMA 864

Query: 161  KTNGNEGIKRETGLYSDKIEMSTPSKGGALWDIFRRQDVPKLEQYLREHSREF 3
              N   G  +E G              GA+WDIFRRQDVPKL++YLR+H REF
Sbjct: 865  SGNKLVGFDKEGG--------------GAVWDIFRRQDVPKLQEYLRKHHREF 903


>ref|XP_002520404.1| conserved hypothetical protein [Ricinus communis]
            gi|223540389|gb|EEF41959.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1099

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -3

Query: 104  EMSTPSKGGALWDIFRRQDVPKLEQYLREHSREF 3
            EM  P +GGA+WDIFRRQDVPKL++YL+EH +EF
Sbjct: 954  EMEKPDEGGAVWDIFRRQDVPKLQEYLKEHFKEF 987


>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
 Frame = -3

Query: 266 EVFSFIHQDLDRKDK--DPEFLSVEQGKAAATVEHVTKTNGNEGIKRETGLYSDK----- 108
           E++  I + +D  +   + + L  EQ K+   ++   +T   E    + GL S       
Sbjct: 671 ELYGGISEAVDESENIVEKDHLLPEQKKSKDQLDEDNETMAEEDASNQDGLNSSSDTTTN 730

Query: 107 -----IEMSTPSKGGALWDIFRRQDVPKLEQYLREHSREF 3
                I+ ST   GGA+WDIFRRQDVPKL +YL++H +EF
Sbjct: 731 DSLQNIDDSTVVHGGAVWDIFRRQDVPKLIEYLQKHQKEF 770


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