BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032002
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               71   1e-10
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               68   8e-10
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    68   8e-10
ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatul...    64   2e-08
ref|NP_175548.4| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    62   6e-08

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = +2

Query: 365 KREDKLTFLPEVTLQHILFFLPTKDAVGASILSTKWRYLWTSVPVLDFSDNLL 523
           K  D+++ LP+  L HI+ FLPTK AVG S+LS +WRYLW S+P LDF D+LL
Sbjct: 7   KSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLL 59


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = +2

Query: 374 DKLTFLPEVTLQHILFFLPTKDAVGASILSTKWRYLWTSVPVLDFSDNL 520
           D ++ LP+  L HIL FLPTK AVG SILS +WRYLW SVP+LDF D L
Sbjct: 10  DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDEL 58


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = +2

Query: 374 DKLTFLPEVTLQHILFFLPTKDAVGASILSTKWRYLWTSVPVLDFSDNL 520
           D ++ LP+  L HIL FLPTK AVG SILS +WRYLW SVP+LDF D L
Sbjct: 10  DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDEL 58


>ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355515056|gb|AES96679.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 703

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = +2

Query: 344 MSKQKVVKREDKLTFLPEVTLQHILFFLPTKDAVGASILSTKWRYLWTSVPVLDF 508
           + +  +   ED ++ LPE  L HIL  LPTKDAV  SIL+TKW+YLWT + + DF
Sbjct: 19  LQRHDIGDMEDMISELPEAVLLHILSLLPTKDAVRTSILATKWKYLWTHLSIFDF 73


>ref|NP_175548.4| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75254657|sp|Q6DBN6.1|FDL6_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g51370
           gi|50198808|gb|AAT70437.1| At1g51370 [Arabidopsis
           thaliana] gi|53828607|gb|AAU94413.1| At1g51370
           [Arabidopsis thaliana] gi|110737690|dbj|BAF00784.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332194537|gb|AEE32658.1| F-box/FBD/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 435

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = +2

Query: 356 KVVKREDKLTFLPEVTLQHILFFLPTKDAVGASILSTKWRYLWTSVPVLD 505
           KV   ED+++ LPE  +  ILF L TKD+V  S LSTKWRYLW SVP LD
Sbjct: 13  KVSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLD 62