BLASTX nr result

ID: Coptis24_contig00031843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031843
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]    93   2e-17
emb|CBI31672.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [V...    91   7e-17
emb|CBI30569.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-li...    84   2e-14

>emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]
          Length = 338

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/120 (45%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
 Frame = -1

Query: 349 DYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXGAEQWRLQ 170
           DYG  D+GLNF GIQP +    GG S +D++F I                   AEQWRLQ
Sbjct: 187 DYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPIGSCSGGGGPILSGGL----AEQWRLQ 242

Query: 169 Q---FPFIGGLEPPPGLYPFEGEGVH-TTYAGGTSQFRARPPTSVATQGQFTPVKMEDHQ 2
           Q   FPF+ GLEPP GLY FEGEG    +Y GG+   RA+   S  T  Q T VK+E++Q
Sbjct: 243 QVQQFPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVT--QMTAVKIEENQ 300


>emb|CBI31672.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 54/120 (45%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
 Frame = -1

Query: 349 DYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXGAEQWRLQ 170
           DYG  D+GLNF GIQP +    GG S +D++F I                   AE WRLQ
Sbjct: 187 DYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPIGSCSGGGGPILSGGL----AEHWRLQ 242

Query: 169 Q---FPFIGGLEPPPGLYPFEGEGVH-TTYAGGTSQFRARPPTSVATQGQFTPVKMEDHQ 2
           Q   FPF+ GLEPP GLY FEGEG    +Y GG+   RA+   S  T  Q T VK+E++Q
Sbjct: 243 QVQQFPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVT--QMTAVKIEENQ 300


>ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [Vitis vinifera]
          Length = 338

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 54/120 (45%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
 Frame = -1

Query: 349 DYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXGAEQWRLQ 170
           DYG  D+GLNF GIQP +    GG S +D++F I                   AE WRLQ
Sbjct: 187 DYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPIGSCSGGGGPILSGGL----AEHWRLQ 242

Query: 169 Q---FPFIGGLEPPPGLYPFEGEGVH-TTYAGGTSQFRARPPTSVATQGQFTPVKMEDHQ 2
           Q   FPF+ GLEPP GLY FEGEG    +Y GG+   RA+   S  T  Q T VK+E++Q
Sbjct: 243 QVQQFPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVT--QMTAVKIEENQ 300


>emb|CBI30569.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/118 (45%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
 Frame = -1

Query: 349 DYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXGAEQWRLQ 170
           DYG  D+GLN+SGI P  V  TG     DM+FQI                    EQWRLQ
Sbjct: 180 DYGAGDIGLNYSGI-PTAVGGTG-----DMNFQIGSL-----------------EQWRLQ 216

Query: 169 Q---FPFIGGLEPPPGLYPFEGEGVHTTYAGGTSQFRARPPTSVATQGQFTPVKMEDH 5
           Q   FPF+GGL+PPPGLYP EG    + Y GG+SQ   RP  + +   Q   VKMED+
Sbjct: 217 QTQQFPFLGGLDPPPGLYPLEGGVEPSNYVGGSSQ--VRPKLTGSGLSQVASVKMEDN 272


>ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-like [Vitis vinifera]
          Length = 333

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 54/123 (43%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
 Frame = -1

Query: 349 DYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXGA-----E 185
           DYG  D+GLN+SGI P  V  TG     DM+FQI                         E
Sbjct: 180 DYGAGDIGLNYSGI-PTAVGGTG-----DMNFQIGSHLGGGSSGGAGGVGGSFLSVGGLE 233

Query: 184 QWRLQQ---FPFIGGLEPPPGLYPFEGEGVHTTYAGGTSQFRARPPTSVATQGQFTPVKM 14
           QWRLQQ   FPF+GGL+PPPGLYP EG    + Y GG+SQ   RP  + +   Q   VKM
Sbjct: 234 QWRLQQTQQFPFLGGLDPPPGLYPLEGGVEPSNYVGGSSQ--VRPKLTGSGLSQVASVKM 291

Query: 13  EDH 5
           ED+
Sbjct: 292 EDN 294


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