BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031784
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   185   7e-45
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   170   2e-40
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-37
gb|EEC70890.1| hypothetical protein OsI_02428 [Oryza sativa Indi...   157   2e-36
ref|NP_001043343.2| Os01g0559500 [Oryza sativa Japonica Group] g...   155   5e-36

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  185 bits (469), Expect = 7e-45
 Identities = 80/128 (62%), Positives = 113/128 (88%)
 Frame = -2

Query: 389 AKRAAILNIQRAPDLVSALARYGEILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKI 210
           A+++AIL +Q++ DL SALAR G++L+VQDLN+ILRH+G   +W+D+S +FDWM+KH+KI
Sbjct: 74  ARQSAILEVQQSSDLGSALARLGDMLKVQDLNVILRHFGKLCRWQDLSQLFDWMQKHEKI 133

Query: 209 NFASYSSFIKFMGKGFNPVKALEVYNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLF 30
            F+SYS++IKFMGK  NP+KALE+YNSIQD+S+R NVS+CNS+L CL++NGKFE+++KLF
Sbjct: 134 TFSSYSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLKLF 193

Query: 29  DEMKRGGL 6
            +MK+ GL
Sbjct: 194 HQMKQDGL 201


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  170 bits (430), Expect = 2e-40
 Identities = 82/164 (50%), Positives = 118/164 (71%), Gaps = 16/164 (9%)
 Frame = -2

Query: 449 SIATSTATPTLQIASNNPK----------------YAKRAAILNIQRAPDLVSALARYGE 318
           S  T+T TP L+   NN +                 A++AAIL +Q++PDL SAL R G 
Sbjct: 49  STNTTTETPLLKQPHNNEQPPNGQFHVQRRHSKSYLARQAAILEVQQSPDLDSALRRLGA 108

Query: 317 ILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKINFASYSSFIKFMGKGFNPVKALEV 138
           IL+ QDLN+ILR+ G +++W+D+S +FDWM++H KI+ +SY+S++KFMGK  NP KALE+
Sbjct: 109 ILKAQDLNVILRNLGKQSRWQDLSKLFDWMQQHSKISVSSYTSYMKFMGKSLNPAKALEI 168

Query: 137 YNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLFDEMKRGGL 6
           YNSI D+S++ NV ICNS+L CLV++GKF+ ++KLF +MK+ GL
Sbjct: 169 YNSIADESVKNNVFICNSVLSCLVRSGKFDISLKLFHKMKQNGL 212


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  160 bits (404), Expect = 2e-37
 Identities = 69/127 (54%), Positives = 103/127 (81%)
 Frame = -2

Query: 386 KRAAILNIQRAPDLVSALARYGEILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKIN 207
           +++AI  ++   +L  ALARYG +L+ QDLN+ILRH+G  ++WKD+S +F+WM++  K N
Sbjct: 77  RQSAIAQVKDCSELAPALARYGGLLKAQDLNVILRHFGMLSRWKDLSQLFEWMQETGKTN 136

Query: 206 FASYSSFIKFMGKGFNPVKALEVYNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLFD 27
            +SYSS+IKFMG+G NP+KALEVYN+I++ S++ ++ ICNSIL CLV+NGKF++++KLF 
Sbjct: 137 VSSYSSYIKFMGRGLNPLKALEVYNNIEEVSIKNSIFICNSILNCLVRNGKFDTSVKLFH 196

Query: 26  EMKRGGL 6
           +MK  GL
Sbjct: 197 QMKNDGL 203


>gb|EEC70890.1| hypothetical protein OsI_02428 [Oryza sativa Indica Group]
          Length = 647

 Score =  157 bits (396), Expect = 2e-36
 Identities = 67/127 (52%), Positives = 99/127 (77%)
 Frame = -2

Query: 386 KRAAILNIQRAPDLVSALARYGEILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKIN 207
           +R+A+  ++ APD V+AL R+ ++L+ QD NIILRHYG   +W ++S +F WM++HD +N
Sbjct: 59  RRSAVAEVKAAPDPVAALTRFEDVLQTQDCNIILRHYGETRRWDELSKVFGWMQEHDMLN 118

Query: 206 FASYSSFIKFMGKGFNPVKALEVYNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLFD 27
            ASYSS+ KF+G   NP +AL+VY +I+++  R +VS+CNS+LGCLVKNG+F+S+ KL+D
Sbjct: 119 IASYSSYFKFLGLSRNPARALQVYGAIRENPTRIHVSVCNSVLGCLVKNGRFDSSFKLYD 178

Query: 26  EMKRGGL 6
           EM R GL
Sbjct: 179 EMIREGL 185


>ref|NP_001043343.2| Os01g0559500 [Oryza sativa Japonica Group]
           gi|255673364|dbj|BAF05257.2| Os01g0559500 [Oryza sativa
           Japonica Group]
          Length = 690

 Score =  155 bits (393), Expect = 5e-36
 Identities = 66/127 (51%), Positives = 99/127 (77%)
 Frame = -2

Query: 386 KRAAILNIQRAPDLVSALARYGEILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKIN 207
           +R+A+  ++ APD V+AL R+ ++L+ QD NIILRHYG   +W ++S +F WM++HD +N
Sbjct: 62  RRSAVAEVKAAPDPVAALTRFEDVLQTQDCNIILRHYGETRRWDELSKVFGWMQEHDMLN 121

Query: 206 FASYSSFIKFMGKGFNPVKALEVYNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLFD 27
            ASYSS+ K++G   NP +AL+VY +I+++  R +VS+CNS+LGCLVKNG+F+S+ KL+D
Sbjct: 122 IASYSSYFKYLGLSRNPARALQVYGAIRENPTRIHVSVCNSVLGCLVKNGRFDSSFKLYD 181

Query: 26  EMKRGGL 6
           EM R GL
Sbjct: 182 EMIREGL 188