BLASTX nr result

ID: Coptis24_contig00031716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031716
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514223.1| multidrug resistance pump, putative [Ricinus...   137   1e-30
emb|CBI27993.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_004157950.1| PREDICTED: multidrug and toxin extrusion pro...   124   8e-27
ref|XP_004141162.1| PREDICTED: multidrug and toxin extrusion pro...   124   8e-27
ref|XP_004157307.1| PREDICTED: multidrug and toxin extrusion pro...   122   2e-26

>ref|XP_002514223.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223546679|gb|EEF48177.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 528

 Score =  137 bits (344), Expect = 1e-30
 Identities = 75/109 (68%), Positives = 88/109 (80%), Gaps = 4/109 (3%)
 Frame = -3

Query: 319 QKSHVYLSVIALPQVLKHQE----KQPPQGQITYSSTISEIIKETKSLFSLAFPIALTAL 152
           +  H+YL++++LP  +K  +    K PP  +I  S  +SEII ETKSLF LAFPI LTAL
Sbjct: 18  ESGHLYLNLLSLPTTIKDLKNVTIKAPPPQEIYPS--VSEIISETKSLFKLAFPIVLTAL 75

Query: 151 LLYSRSILSMLFLGKLGDIELAAGSLAIAFANITGYSVLSGLALGMEPL 5
           +LYSRSI+SMLFLG LGD+ELAAGSLAIAFANITGYSVLSGLALGMEPL
Sbjct: 76  ILYSRSIVSMLFLGHLGDLELAAGSLAIAFANITGYSVLSGLALGMEPL 124


>emb|CBI27993.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  125 bits (315), Expect = 3e-27
 Identities = 70/103 (67%), Positives = 80/103 (77%), Gaps = 3/103 (2%)
 Frame = -3

Query: 304 YLSVIALPQVLK--HQEKQPPQGQITY-SSTISEIIKETKSLFSLAFPIALTALLLYSRS 134
           Y   ++LP  +K     K  P+ Q  +   ++SEII E KSLF L+FPIALTAL+LYSRS
Sbjct: 20  YFDFLSLPNCIKDFQNSKTNPEKQSQFVCPSLSEIITEAKSLFHLSFPIALTALILYSRS 79

Query: 133 ILSMLFLGKLGDIELAAGSLAIAFANITGYSVLSGLALGMEPL 5
           I SMLFLG LGDI+LAAGSLAIAFANITGYSVLSGLALGMEPL
Sbjct: 80  IFSMLFLGHLGDIQLAAGSLAIAFANITGYSVLSGLALGMEPL 122


>ref|XP_004157950.1| PREDICTED: multidrug and toxin extrusion protein 1-like, partial
           [Cucumis sativus]
          Length = 470

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/83 (79%), Positives = 74/83 (89%)
 Frame = -3

Query: 253 PPQGQITYSSTISEIIKETKSLFSLAFPIALTALLLYSRSILSMLFLGKLGDIELAAGSL 74
           PP  Q  +S   S+I+ E KSLFSLAFPIALTAL++YSRSI+SMLFLG+LGD+ELAAGSL
Sbjct: 6   PPPPQQLFSC--SQIVTEAKSLFSLAFPIALTALIIYSRSIISMLFLGRLGDMELAAGSL 63

Query: 73  AIAFANITGYSVLSGLALGMEPL 5
           AIAFANITGYSVLSGLALGMEPL
Sbjct: 64  AIAFANITGYSVLSGLALGMEPL 86


>ref|XP_004141162.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Cucumis
           sativus]
          Length = 518

 Score =  124 bits (311), Expect = 8e-27
 Identities = 68/89 (76%), Positives = 75/89 (84%)
 Frame = -3

Query: 271 KHQEKQPPQGQITYSSTISEIIKETKSLFSLAFPIALTALLLYSRSILSMLFLGKLGDIE 92
           K Q   PP  Q   S   S+I+ E KSLFSLAFPIALTAL++YSRSI+SMLFLG+LGD+E
Sbjct: 36  KKQLPPPPPPQQLLSC--SQIVTEAKSLFSLAFPIALTALIIYSRSIISMLFLGRLGDME 93

Query: 91  LAAGSLAIAFANITGYSVLSGLALGMEPL 5
           LAAGSLAIAFANITGYSVLSGLALGMEPL
Sbjct: 94  LAAGSLAIAFANITGYSVLSGLALGMEPL 122


>ref|XP_004157307.1| PREDICTED: multidrug and toxin extrusion protein 2-like [Cucumis
           sativus]
          Length = 538

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/74 (86%), Positives = 68/74 (91%)
 Frame = -3

Query: 226 STISEIIKETKSLFSLAFPIALTALLLYSRSILSMLFLGKLGDIELAAGSLAIAFANITG 47
           S++ EI  E KSLFSLAFPI LTAL+LYSRSILSMLFLG LGD+ELAAGSLAIAFANITG
Sbjct: 56  SSVIEIFNEAKSLFSLAFPIVLTALILYSRSILSMLFLGHLGDLELAAGSLAIAFANITG 115

Query: 46  YSVLSGLALGMEPL 5
           YSVLSGLALGMEPL
Sbjct: 116 YSVLSGLALGMEPL 129


Top