BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031666
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...   136   6e-39
gb|ABF93471.1| RNA methyltransferase, TrmH family protein, expre...   136   3e-38
gb|EEE58139.1| hypothetical protein OsJ_09050 [Oryza sativa Japo...   136   3e-38
gb|EEC74324.1| hypothetical protein OsI_09608 [Oryza sativa Indi...   136   3e-38
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   132   2e-37

>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
            predicted protein [Populus trichocarpa]
          Length = 1224

 Score =  136 bits (343), Expect(2) = 6e-39
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = -3

Query: 284  LYMYEQRNNMPSIRQYLETFAIQIYLKFPSLVKEQLSPIFQDHNMRPQALSSYVFIAANV 105
            L++   RNN P++RQYLETFAI IYLKFP LV+EQL PI +D+NM+PQALSSYVFIAANV
Sbjct: 779  LHISLYRNNFPAVRQYLETFAINIYLKFPLLVREQLVPILRDYNMKPQALSSYVFIAANV 838

Query: 104  ILHTTEEIVRFRHLNELLPPITPLLTSHHHSLRG 3
            ILH +    + RH NELLPPI PLLTSHHHSLRG
Sbjct: 839  ILHAS-NANQSRHFNELLPPIIPLLTSHHHSLRG 871



 Score = 49.3 bits (116), Expect(2) = 6e-39
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -2

Query: 360 WQMICILSRFVDEDIVQQVTASLHITIY 277
           WQMIC+LSRFV +DIV QVT SLHI++Y
Sbjct: 757 WQMICVLSRFVTDDIVAQVTHSLHISLY 784


>gb|ABF93471.1| RNA methyltransferase, TrmH family protein, expressed [Oryza sativa
            Japonica Group]
          Length = 1727

 Score =  136 bits (343), Expect(2) = 3e-38
 Identities = 65/88 (73%), Positives = 74/88 (84%)
 Frame = -3

Query: 266  RNNMPSIRQYLETFAIQIYLKFPSLVKEQLSPIFQDHNMRPQALSSYVFIAANVILHTTE 87
            RNN+P++RQYLETFAI IYLKFP+L +EQL PIF D+ MR QALSSYVFIAAN+ILH+ E
Sbjct: 1279 RNNLPAVRQYLETFAILIYLKFPALAEEQLIPIFHDNEMRQQALSSYVFIAANLILHSRE 1338

Query: 86   EIVRFRHLNELLPPITPLLTSHHHSLRG 3
              V+  HLNEL PPI P LTSHHHSLRG
Sbjct: 1339 LAVQINHLNELFPPIMPFLTSHHHSLRG 1366



 Score = 47.0 bits (110), Expect(2) = 3e-38
 Identities = 17/28 (60%), Positives = 27/28 (96%)
 Frame = -2

Query: 360  WQMICILSRFVDEDIVQQVTASLHITIY 277
            WQMIC+LS++V++DIV++VT+S+HI +Y
Sbjct: 1251 WQMICVLSQYVEDDIVKEVTSSIHICLY 1278


>gb|EEE58139.1| hypothetical protein OsJ_09050 [Oryza sativa Japonica Group]
          Length = 1695

 Score =  136 bits (343), Expect(2) = 3e-38
 Identities = 65/88 (73%), Positives = 74/88 (84%)
 Frame = -3

Query: 266  RNNMPSIRQYLETFAIQIYLKFPSLVKEQLSPIFQDHNMRPQALSSYVFIAANVILHTTE 87
            RNN+P++RQYLETFAI IYLKFP+L +EQL PIF D+ MR QALSSYVFIAAN+ILH+ E
Sbjct: 1247 RNNLPAVRQYLETFAILIYLKFPALAEEQLIPIFHDNEMRQQALSSYVFIAANLILHSRE 1306

Query: 86   EIVRFRHLNELLPPITPLLTSHHHSLRG 3
              V+  HLNEL PPI P LTSHHHSLRG
Sbjct: 1307 LAVQINHLNELFPPIMPFLTSHHHSLRG 1334



 Score = 47.0 bits (110), Expect(2) = 3e-38
 Identities = 17/28 (60%), Positives = 27/28 (96%)
 Frame = -2

Query: 360  WQMICILSRFVDEDIVQQVTASLHITIY 277
            WQMIC+LS++V++DIV++VT+S+HI +Y
Sbjct: 1219 WQMICVLSQYVEDDIVKEVTSSIHICLY 1246


>gb|EEC74324.1| hypothetical protein OsI_09608 [Oryza sativa Indica Group]
          Length = 1489

 Score =  136 bits (343), Expect(2) = 3e-38
 Identities = 65/88 (73%), Positives = 74/88 (84%)
 Frame = -3

Query: 266  RNNMPSIRQYLETFAIQIYLKFPSLVKEQLSPIFQDHNMRPQALSSYVFIAANVILHTTE 87
            RNN+P++RQYLETFAI IYLKFP+L +EQL PIF D+ MR QALSSYVFIAAN+ILH+ E
Sbjct: 1041 RNNLPAVRQYLETFAILIYLKFPALAEEQLIPIFHDNEMRQQALSSYVFIAANLILHSRE 1100

Query: 86   EIVRFRHLNELLPPITPLLTSHHHSLRG 3
              V+  HLNEL PPI P LTSHHHSLRG
Sbjct: 1101 LAVQINHLNELFPPIMPFLTSHHHSLRG 1128



 Score = 47.0 bits (110), Expect(2) = 3e-38
 Identities = 17/28 (60%), Positives = 27/28 (96%)
 Frame = -2

Query: 360  WQMICILSRFVDEDIVQQVTASLHITIY 277
            WQMIC+LS++V++DIV++VT+S+HI +Y
Sbjct: 1013 WQMICVLSQYVEDDIVKEVTSSIHICLY 1040


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score =  132 bits (333), Expect(2) = 2e-37
 Identities = 68/99 (68%), Positives = 82/99 (82%), Gaps = 5/99 (5%)
 Frame = -3

Query: 284  LYMYEQRNNMPSIRQYLETFAIQIYLKFPSLVKEQLSPIFQDHNMRPQ-----ALSSYVF 120
            L++   RNN+P++RQYLETFAI IYLKFP+LV EQL PI +D++MRPQ     ALSSYVF
Sbjct: 1295 LHIALYRNNLPAVRQYLETFAINIYLKFPTLVGEQLVPILRDYDMRPQVNITSALSSYVF 1354

Query: 119  IAANVILHTTEEIVRFRHLNELLPPITPLLTSHHHSLRG 3
            IAAN+ILHT++   + RHL+ELLPPI PLLTSHHHSLRG
Sbjct: 1355 IAANIILHTSKAF-QSRHLDELLPPILPLLTSHHHSLRG 1392



 Score = 47.8 bits (112), Expect(2) = 2e-37
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -2

Query: 360  WQMICILSRFVDEDIVQQVTASLHITIY 277
            WQMIC+LSRFV +DIV +VT SLHI +Y
Sbjct: 1273 WQMICVLSRFVTDDIVGKVTCSLHIALY 1300