BLASTX nr result

ID: Coptis24_contig00031589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031589
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310773.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003637255.1| Oxygen-evolving enhancer protein, partial [M...    84   9e-15
ref|XP_002880522.1| hypothetical protein ARALYDRAFT_343930 [Arab...    81   8e-14
ref|XP_004141949.1| PREDICTED: uncharacterized protein LOC101203...    81   1e-13
ref|XP_003631861.1| PREDICTED: uncharacterized protein LOC100853...    79   5e-13

>ref|XP_002310773.1| predicted protein [Populus trichocarpa] gi|222853676|gb|EEE91223.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 50/98 (51%), Positives = 61/98 (62%), Gaps = 16/98 (16%)
 Frame = -2

Query: 346 WLGSFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHLEVSVVS----- 182
           W  + LF+KVVIEDYV+  AGF SL++ ERVVREK GSGLV+ISM+LHLE S        
Sbjct: 65  WFAALLFVKVVIEDYVNGTAGFWSLDVSERVVREKTGSGLVLISMILHLEASSEPKHSKM 124

Query: 181 -----------EYGDVLLVAFSYGVPLVFFMFLKGEIR 101
                      EYG   LV FS G+P VFF+   GE++
Sbjct: 125 PRKRREFPRSVEYGMASLVIFSLGLPFVFFVIHDGEMK 162


>ref|XP_003637255.1| Oxygen-evolving enhancer protein, partial [Medicago truncatula]
           gi|355503190|gb|AES84393.1| Oxygen-evolving enhancer
           protein, partial [Medicago truncatula]
          Length = 98

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 8/91 (8%)
 Frame = -2

Query: 346 WLGSFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHLEVS-------- 191
           W+G  L  KVV+EDYV E+AGF SL+L ERVVREKVGS  V+IS+   +E +        
Sbjct: 8   WIGILLCSKVVVEDYVYEIAGFWSLDLSERVVREKVGSIFVIISIFFQMEAASDVQKVFQ 67

Query: 190 VVSEYGDVLLVAFSYGVPLVFFMFLKGEIRL 98
              + G ++LV FSY +P VFF+ LKGE++L
Sbjct: 68  TTLDAGMLVLVVFSYLLPFVFFVVLKGEMKL 98


>ref|XP_002880522.1| hypothetical protein ARALYDRAFT_343930 [Arabidopsis lyrata subsp.
           lyrata] gi|297326361|gb|EFH56781.1| hypothetical protein
           ARALYDRAFT_343930 [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = -2

Query: 352 AFWLGSFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHLEVSVVS-EY 176
           A  LG FL +KVV+ED + E  G  SL+L  RVVREK+GSGLV+ SM+L L+ S  + ++
Sbjct: 67  ALSLGLFLLVKVVVEDVITEKVGVLSLDLTHRVVREKIGSGLVIASMVLQLQSSSETIDF 126

Query: 175 GDVLLVAFSYGVPLVFFMFLKGEIRL 98
           G V +V F YG+P  FF   KGEI++
Sbjct: 127 GMVAIVVFGYGLPFWFFTIEKGEIKI 152


>ref|XP_004141949.1| PREDICTED: uncharacterized protein LOC101203807 [Cucumis sativus]
           gi|449497709|ref|XP_004160489.1| PREDICTED:
           uncharacterized LOC101203807 [Cucumis sativus]
          Length = 168

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 20/104 (19%)
 Frame = -2

Query: 352 AFWLGSFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHLEVSVVSE-- 179
           A  +G  L++KVV EDY++ +AGF SL+L ERVVREK GSGLV+ SM+LHL  +  S   
Sbjct: 64  AMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSSSPK 123

Query: 178 ------------------YGDVLLVAFSYGVPLVFFMFLKGEIR 101
                             YG   LVAFSYG+P+ FF+  KG+++
Sbjct: 124 LRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMK 167


>ref|XP_003631861.1| PREDICTED: uncharacterized protein LOC100853825 [Vitis vinifera]
           gi|297735228|emb|CBI17590.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 15/99 (15%)
 Frame = -2

Query: 352 AFWLGSFLFLKVVIEDYVDELAGFGSLNLEERVVREKVGSGLVMISMLLHLEVSVVS--- 182
           A WLG FLF+KV +E++V  +AGF SL+L+E+VVREK GSG V+ SM L L+ + V    
Sbjct: 66  ALWLGVFLFIKVAVEEFVYGIAGFWSLDLKEKVVREKFGSGFVVNSMYLQLQAASVQKDY 125

Query: 181 ------------EYGDVLLVAFSYGVPLVFFMFLKGEIR 101
                       E G  +LV  SYG+   FF+  KGE++
Sbjct: 126 VKRKEKKVPRYVECGMAILVVASYGMSFGFFVLQKGEMK 164


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