BLASTX nr result

ID: Coptis24_contig00031582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031582
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516665.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_003544046.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine...    68   7e-10
emb|CBI23014.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_002272529.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis v...    68   7e-10
ref|XP_002321997.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>ref|XP_002516665.1| conserved hypothetical protein [Ricinus communis]
           gi|223544160|gb|EEF45684.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 452

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 15/80 (18%)
 Frame = -1

Query: 197 YESNAHHND-----------GFYTKEIDKPQLGWNWLERWMSSQPWQGRHLGTMEGSYVA 51
           Y+   HH             GFY  E +K Q GWNWLERWMSSQP+  RHLG  E SY+ 
Sbjct: 258 YQQQHHHQQPLQSDPNGKEMGFYENEREKAQWGWNWLERWMSSQPYHARHLGPNEASYMT 317

Query: 50  L----RNADNISEKTVEMDM 3
           L       D++SEKTVEMD+
Sbjct: 318 LTTTTTTTDDMSEKTVEMDV 337


>ref|XP_003544046.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]
          Length = 464

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
 Frame = -1

Query: 155 EIDKPQLGWNWLERWMSSQPWQGRHLGTMEGSYVALRN-----ADNISEKTVEMDM 3
           E +K Q GWNWLERWMSSQP+  R++G  E SY+ L +      DN+SEKTVEMDM
Sbjct: 279 EHEKAQWGWNWLERWMSSQPYNVRNMGPHETSYMTLASTTSTTTDNMSEKTVEMDM 334


>emb|CBI23014.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = -1

Query: 194 ESNAHHNDG-FYTKEIDKPQLGWNWLERWMSSQPWQGRHLGTMEGSYVALRNADNISEKT 18
           ES    NDG     E +K Q GWNWLERWM+SQP+  R     + SY+ L   DN+SEKT
Sbjct: 269 ESIPSRNDGGLNDNEREKSQWGWNWLERWMASQPYHFRQSSPHDPSYMTLPTTDNMSEKT 328

Query: 17  VEMDM 3
           VEMD+
Sbjct: 329 VEMDV 333


>ref|XP_002272529.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]
          Length = 466

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = -1

Query: 194 ESNAHHNDG-FYTKEIDKPQLGWNWLERWMSSQPWQGRHLGTMEGSYVALRNADNISEKT 18
           ES    NDG     E +K Q GWNWLERWM+SQP+  R     + SY+ L   DN+SEKT
Sbjct: 257 ESIPSRNDGGLNDNEREKSQWGWNWLERWMASQPYHFRQSSPHDPSYMTLPTTDNMSEKT 316

Query: 17  VEMDM 3
           VEMD+
Sbjct: 317 VEMDV 321


>ref|XP_002321997.1| predicted protein [Populus trichocarpa] gi|222868993|gb|EEF06124.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
 Frame = -1

Query: 170 GFYTKEIDKPQLGWNWLERWMSSQPWQGRHLGTMEGSYVALR------NADNISEKTVEM 9
           G +    +K Q GWNWLE WMS+QP+  R LG  EGSYV L         D++SEKTVEM
Sbjct: 259 GHFVDGSEKAQWGWNWLEGWMSAQPYNVRQLGPNEGSYVTLNTTTATATTDDMSEKTVEM 318

Query: 8   DM 3
           DM
Sbjct: 319 DM 320


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