BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031575
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...    69   4e-10
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...    67   2e-09
ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methy...    60   2e-07
ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methy...    60   2e-07
ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arab...    60   2e-07

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
           vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
           product [Vitis vinifera]
          Length = 335

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = +3

Query: 3   CTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLIVK 116
           CT+ EIEEAL NVG+P TSRPEELTLDDFVRLHNLIVK
Sbjct: 297 CTSIEIEEALRNVGLPATSRPEELTLDDFVRLHNLIVK 334


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
           gi|223548969|gb|EEF50458.1| dimethyladenosine
           transferase, putative [Ricinus communis]
          Length = 338

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = +3

Query: 3   CTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLIVK 116
           CT+PEIE+AL NVG+P TSRPEELTLDDFV+LHNLI +
Sbjct: 300 CTSPEIEQALINVGLPATSRPEELTLDDFVKLHNLIAR 337


>ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Glycine max]
          Length = 341

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   CTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLIVK 116
           CT+ EIEEAL ++G+  TSRPEELTLDDFV+LHNLI K
Sbjct: 303 CTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAK 340


>ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Glycine max]
          Length = 341

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   CTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLIVK 116
           CT+ EIEEAL ++G+  TSRPEELTLDDFV+LHNLI K
Sbjct: 303 CTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAK 340


>ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arabidopsis lyrata subsp.
           lyrata] gi|297335191|gb|EFH65608.1| hypothetical protein
           ARALYDRAFT_470090 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = +3

Query: 6   TAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLI 110
           ++PEIE+ALG  G+PVTSRPEELTLDDFV+LHN+I
Sbjct: 305 SSPEIEKALGVAGLPVTSRPEELTLDDFVKLHNVI 339