BLASTX nr result

ID: Coptis24_contig00031529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031529
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563446.1| PREDICTED: protein SCO1 homolog 1, mitochond...   129   2e-28
ref|XP_002453341.1| hypothetical protein SORBIDRAFT_04g004150 [S...   127   9e-28
ref|XP_002532105.1| Protein sco1, putative [Ricinus communis] gi...   127   9e-28
ref|NP_001130056.1| uncharacterized protein LOC100191148 [Zea ma...   127   9e-28
dbj|BAJ98531.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   1e-27

>ref|XP_003563446.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 314

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/73 (79%), Positives = 70/73 (95%)
 Frame = +3

Query: 3   VGLTGSVDEVRKVARAYRVYYMKTEEEGSDYLVDHSIIMYLMDPNMEYVKFFGKNHDVDS 182
           +GLTG+ DEVR+VARAYRVYYMKTEEEGSDYLVDHSI+MYLM+P ME+VKFFGKN+DVDS
Sbjct: 240 IGLTGTTDEVRQVARAYRVYYMKTEEEGSDYLVDHSIVMYLMNPKMEFVKFFGKNYDVDS 299

Query: 183 LTEGIIQEIKQYK 221
           L EGI++EI+++K
Sbjct: 300 LAEGIVKEIREHK 312


>ref|XP_002453341.1| hypothetical protein SORBIDRAFT_04g004150 [Sorghum bicolor]
           gi|241933172|gb|EES06317.1| hypothetical protein
           SORBIDRAFT_04g004150 [Sorghum bicolor]
          Length = 329

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/74 (77%), Positives = 70/74 (94%)
 Frame = +3

Query: 3   VGLTGSVDEVRKVARAYRVYYMKTEEEGSDYLVDHSIIMYLMDPNMEYVKFFGKNHDVDS 182
           +GLTG+ DEVR+VARAYRVYYMKTEEEGSDYLVDHSI+MYLM+P M++VKF+GKN+D DS
Sbjct: 255 IGLTGTTDEVRQVARAYRVYYMKTEEEGSDYLVDHSIVMYLMNPEMKFVKFYGKNYDTDS 314

Query: 183 LTEGIIQEIKQYKK 224
           L +GII+EIK++KK
Sbjct: 315 LADGIIKEIKEHKK 328


>ref|XP_002532105.1| Protein sco1, putative [Ricinus communis]
           gi|223528208|gb|EEF30267.1| Protein sco1, putative
           [Ricinus communis]
          Length = 292

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/73 (79%), Positives = 68/73 (93%)
 Frame = +3

Query: 3   VGLTGSVDEVRKVARAYRVYYMKTEEEGSDYLVDHSIIMYLMDPNMEYVKFFGKNHDVDS 182
           VGLTG+ +E++K ARAYRVYYMKT EE SDYLVDHSI+MYLM PNM+YVKFFGKN+DVDS
Sbjct: 217 VGLTGNPEEIKKAARAYRVYYMKTTEEDSDYLVDHSIVMYLMGPNMDYVKFFGKNNDVDS 276

Query: 183 LTEGIIQEIKQYK 221
           LT+G+I+EIKQYK
Sbjct: 277 LTDGVIKEIKQYK 289


>ref|NP_001130056.1| uncharacterized protein LOC100191148 [Zea mays]
           gi|194688186|gb|ACF78177.1| unknown [Zea mays]
           gi|223972835|gb|ACN30605.1| unknown [Zea mays]
           gi|223974569|gb|ACN31472.1| unknown [Zea mays]
           gi|413935659|gb|AFW70210.1| hypothetical protein
           ZEAMMB73_243052 [Zea mays]
          Length = 307

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/73 (78%), Positives = 69/73 (94%)
 Frame = +3

Query: 3   VGLTGSVDEVRKVARAYRVYYMKTEEEGSDYLVDHSIIMYLMDPNMEYVKFFGKNHDVDS 182
           VGLTG+ DEVR+VARAYRVYYMKTEEEGSDYLVDHSI+MYLMDP M++VKF+GKN+D DS
Sbjct: 235 VGLTGTTDEVRQVARAYRVYYMKTEEEGSDYLVDHSIVMYLMDPEMKFVKFYGKNYDTDS 294

Query: 183 LTEGIIQEIKQYK 221
           L +GI++EIK++K
Sbjct: 295 LADGIVKEIKEHK 307


>dbj|BAJ98531.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 326

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/73 (79%), Positives = 69/73 (94%)
 Frame = +3

Query: 3   VGLTGSVDEVRKVARAYRVYYMKTEEEGSDYLVDHSIIMYLMDPNMEYVKFFGKNHDVDS 182
           +GLTG+ DEVRKVARAYRVYYMKTEEEGSDYLVDHSI+MYLM+P ME+VKFFGKN+D D+
Sbjct: 253 IGLTGTSDEVRKVARAYRVYYMKTEEEGSDYLVDHSIVMYLMNPKMEFVKFFGKNYDEDT 312

Query: 183 LTEGIIQEIKQYK 221
           L EGII+EI+++K
Sbjct: 313 LAEGIIKEIREHK 325


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