BLASTX nr result

ID: Coptis24_contig00031480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031480
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266...   238   5e-61
emb|CBI33596.3| unnamed protein product [Vitis vinifera]              238   5e-61
ref|XP_003567002.1| PREDICTED: uncharacterized protein LOC100835...   233   2e-59
ref|XP_002305846.1| predicted protein [Populus trichocarpa] gi|2...   230   1e-58
ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis] gi...   226   1e-57

>ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
          Length = 1449

 Score =  238 bits (606), Expect = 5e-61
 Identities = 113/149 (75%), Positives = 130/149 (87%)
 Frame = -1

Query: 449 LDTTYCNPKFVFPAQVESVNYVVETIKRIKVENEGLEKNVLFLIATYVIGKEKILLEIAD 270
           LDTTYCNPKFVFP+Q ESV+Y+VE I+RI +EN+GL K+VLFL+ATYVIGKE+ILLEI+ 
Sbjct: 231 LDTTYCNPKFVFPSQDESVDYIVEAIERIGLENKGLMKSVLFLVATYVIGKERILLEISR 290

Query: 269 KCRCKIYVDSRKMDILRVLGFGDRGVFTEDVSVSDVHVVGWNVLGETWPYFRPNFSKMKE 90
           +  CKI+VD RKM +LRVLG+ D GVFTED S SDVHVVGWNVLGETWPYFRPNF KMKE
Sbjct: 291 RRNCKIHVDGRKMSVLRVLGYEDGGVFTEDESKSDVHVVGWNVLGETWPYFRPNFVKMKE 350

Query: 89  IMSESGYSKVVGFVPTGWMYEAKKDGFAV 3
           IM E GYSKVVGFVPTGW YE K++ FA+
Sbjct: 351 IMIERGYSKVVGFVPTGWTYEVKRNKFAM 379


>emb|CBI33596.3| unnamed protein product [Vitis vinifera]
          Length = 1390

 Score =  238 bits (606), Expect = 5e-61
 Identities = 113/149 (75%), Positives = 130/149 (87%)
 Frame = -1

Query: 449 LDTTYCNPKFVFPAQVESVNYVVETIKRIKVENEGLEKNVLFLIATYVIGKEKILLEIAD 270
           LDTTYCNPKFVFP+Q ESV+Y+VE I+RI +EN+GL K+VLFL+ATYVIGKE+ILLEI+ 
Sbjct: 188 LDTTYCNPKFVFPSQDESVDYIVEAIERIGLENKGLMKSVLFLVATYVIGKERILLEISR 247

Query: 269 KCRCKIYVDSRKMDILRVLGFGDRGVFTEDVSVSDVHVVGWNVLGETWPYFRPNFSKMKE 90
           +  CKI+VD RKM +LRVLG+ D GVFTED S SDVHVVGWNVLGETWPYFRPNF KMKE
Sbjct: 248 RRNCKIHVDGRKMSVLRVLGYEDGGVFTEDESKSDVHVVGWNVLGETWPYFRPNFVKMKE 307

Query: 89  IMSESGYSKVVGFVPTGWMYEAKKDGFAV 3
           IM E GYSKVVGFVPTGW YE K++ FA+
Sbjct: 308 IMIERGYSKVVGFVPTGWTYEVKRNKFAM 336


>ref|XP_003567002.1| PREDICTED: uncharacterized protein LOC100835014 [Brachypodium
           distachyon]
          Length = 1365

 Score =  233 bits (593), Expect = 2e-59
 Identities = 110/150 (73%), Positives = 125/150 (83%), Gaps = 1/150 (0%)
 Frame = -1

Query: 449 LDTTYCNPKFVFPAQVESVNYVVETIKRIKVENEGLEKNVLFLIATYVIGKEKILLEIAD 270
           LDTTYCNPKF FP+Q ESV YVV TIK++K E+E   + VLFLIATYV+GKEKILLE+A 
Sbjct: 189 LDTTYCNPKFTFPSQEESVEYVVNTIKQVKEESEAAGERVLFLIATYVVGKEKILLEVAR 248

Query: 269 KCRCKIYVDSRKMDILRVLGFG-DRGVFTEDVSVSDVHVVGWNVLGETWPYFRPNFSKMK 93
           +C C I+VDSRKM IL  LGFG ++GVFTED + SDVHV GWN+LGETWPYFRPNF KMK
Sbjct: 249 RCGCMIHVDSRKMKILTGLGFGGEKGVFTEDAAASDVHVTGWNILGETWPYFRPNFVKMK 308

Query: 92  EIMSESGYSKVVGFVPTGWMYEAKKDGFAV 3
           EIM E GY+K V FVPTGWMYE KK+GFAV
Sbjct: 309 EIMMERGYTKAVSFVPTGWMYETKKEGFAV 338


>ref|XP_002305846.1| predicted protein [Populus trichocarpa] gi|222848810|gb|EEE86357.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score =  230 bits (586), Expect = 1e-58
 Identities = 111/151 (73%), Positives = 128/151 (84%), Gaps = 2/151 (1%)
 Frame = -1

Query: 449 LDTTYCNPKFVFPAQVESVNYVVETIKRIKVE--NEGLEKNVLFLIATYVIGKEKILLEI 276
           LDTTYCNPKFVFP Q ESV+YVV  I++I  E  + GLEK VLFL+ATYV+GKEKIL+EI
Sbjct: 18  LDTTYCNPKFVFPLQEESVDYVVSAIEKIGGEGFSGGLEKRVLFLVATYVVGKEKILIEI 77

Query: 275 ADKCRCKIYVDSRKMDILRVLGFGDRGVFTEDVSVSDVHVVGWNVLGETWPYFRPNFSKM 96
           A +C  K+YVD+RKM++LRVLG G+ GVFTED + SDVHVVGWNVLGETWPYFRPNF KM
Sbjct: 78  ARRCNRKVYVDARKMEVLRVLGCGESGVFTEDENESDVHVVGWNVLGETWPYFRPNFVKM 137

Query: 95  KEIMSESGYSKVVGFVPTGWMYEAKKDGFAV 3
           KEIM E GY+KVVGFVPTGW YE K++ FAV
Sbjct: 138 KEIMVERGYNKVVGFVPTGWTYEVKRNKFAV 168


>ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
           gi|223532518|gb|EEF34307.1| DNA ligase I, putative
           [Ricinus communis]
          Length = 1360

 Score =  226 bits (576), Expect = 1e-57
 Identities = 103/149 (69%), Positives = 125/149 (83%)
 Frame = -1

Query: 449 LDTTYCNPKFVFPAQVESVNYVVETIKRIKVENEGLEKNVLFLIATYVIGKEKILLEIAD 270
           LDTTYCNPKFVFP Q ES++YVV  I+RI  + + + K VLFL+ATYV+GKE+IL+EIA 
Sbjct: 185 LDTTYCNPKFVFPKQQESIDYVVSVIERIGGDFQAMSKRVLFLVATYVVGKERILIEIAK 244

Query: 269 KCRCKIYVDSRKMDILRVLGFGDRGVFTEDVSVSDVHVVGWNVLGETWPYFRPNFSKMKE 90
           +CR K++VD RKM++LRVLG+G+ GVFTED   SDVHVVGWNVLGETWPYFRPNF+ MKE
Sbjct: 245 RCRRKVHVDRRKMEVLRVLGYGESGVFTEDEGQSDVHVVGWNVLGETWPYFRPNFANMKE 304

Query: 89  IMSESGYSKVVGFVPTGWMYEAKKDGFAV 3
           IM E GYS++VGFVPTGW YE K + F+V
Sbjct: 305 IMVERGYSRIVGFVPTGWTYEVKHNKFSV 333


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