BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031473
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   248   4e-64
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   220   8e-56
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi...   213   1e-53
ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2...   197   6e-49

>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  248 bits (633), Expect = 4e-64
 Identities = 117/172 (68%), Positives = 142/172 (82%)
 Frame = +1

Query: 4   ISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKGS 183
           ISGLCKV+N  LIE+LL DMD+L  VPDIWAYNIYLN+LC E +LD A+ V++TM  KG 
Sbjct: 86  ISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGR 145

Query: 184 EPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAYE 363
           EPD+VTYT +I+G C+ GR++SAVEIW  MV +GFSPD  AC ALV GLC  GKVDLAYE
Sbjct: 146 EPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYE 205

Query: 364 LTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
           LT+G M+ +++FS S+YN+LI+GFCQAG +DKAQ I +FMRRNGCEPDLVTY
Sbjct: 206 LTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTY 257



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 55/173 (31%), Positives = 88/173 (50%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           L+ GLCK   L     ++ +  +   + D+ +YN  +  LC       A ++ + M  KG
Sbjct: 295 LLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKG 354

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAY 360
             PDVVT+T +I  F + G    A ++  +M G G  PD V    +V  LC+ GK+ +A+
Sbjct: 355 ITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAH 414

Query: 361 ELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
            +   M++  +   +  YNALI+G C+A RV +A  +   M   G  PD VT+
Sbjct: 415 SVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTF 467



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/141 (29%), Positives = 68/141 (48%)
 Frame = +1

Query: 97  YNIYLNVLCKEERLDTAIEVLKTMYCKGSEPDVVTYTTIIDGFCKFGRYESAVEIWHEMV 276
           YN  +N  C+   +D A  ++  M   G EPD+VTY  +++  C     E A  +  +M 
Sbjct: 222 YNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKME 281

Query: 277 GRGFSPDVVACGALVFGLCERGKVDLAYELTLGMMKHQVEFSISVYNALISGFCQAGRVD 456
             G  PDV +   L+ GLC+  ++D AY + +  M+ +    +  YN +I   C A    
Sbjct: 282 RSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTK 341

Query: 457 KAQVIKAFMRRNGCEPDLVTY 519
           +A  +   M   G  PD+VT+
Sbjct: 342 RAYKLFEEMGGKGITPDVVTF 362



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/137 (30%), Positives = 66/137 (48%)
 Frame = +1

Query: 97  YNIYLNVLCKEERLDTAIEVLKTMYCKGSEPDVVTYTTIIDGFCKFGRYESAVEIWHEMV 276
           YN ++ VL ++ R D A +    M  +G   +  TY+  I G CK   +    ++  +M 
Sbjct: 47  YNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMD 106

Query: 277 GRGFSPDVVACGALVFGLCERGKVDLAYELTLGMMKHQVEFSISVYNALISGFCQAGRVD 456
             G+ PD+ A    +  LC   ++D+A  +   M++   E  I  Y  +I+G C+AGR D
Sbjct: 107 RLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFD 166

Query: 457 KAQVIKAFMRRNGCEPD 507
            A  I   M R G  PD
Sbjct: 167 SAVEIWRNMVRKGFSPD 183



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/107 (29%), Positives = 55/107 (51%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           ++  LCK   +G+   +  DM +  + PD+ +YN  +N LC+  R+  A+ + + M+  G
Sbjct: 400 IVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGG 459

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALV 321
             PD VT+  II G     +   A  +W +M+ +GF+ D      LV
Sbjct: 460 PCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLV 506



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/143 (27%), Positives = 67/143 (46%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           LI    +  +  + ++LL  M  L L+PD   Y   ++ LCK  ++  A  V   M   G
Sbjct: 365 LIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESG 424

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAY 360
             PDVV+Y  +I+G C+  R   A+ ++ +M   G  PD V    ++ GL    K+ +A 
Sbjct: 425 ITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVAC 484

Query: 361 ELTLGMMKHQVEFSISVYNALIS 429
            +   MM+       +V   L++
Sbjct: 485 RVWDQMMEKGFTLDGAVSETLVN 507


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  220 bits (561), Expect = 8e-56
 Identities = 104/173 (60%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
 Frame = +1

Query: 4   ISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKGS 183
           I+GLCKV+N   I+ LLHDM+ L  +PDIWA+NIYL++L  E R+D A+EV + +   G 
Sbjct: 86  ITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGR 145

Query: 184 EPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAYE 363
           +PDVVTYT II G CK  ++++A++ W +M+ +GFSPD  ACGA+V GLC+  KVDLAYE
Sbjct: 146 KPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYE 205

Query: 364 LTLGMMKH-QVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
           L + +MK  +V+ S  VYNALISGFC+AGR+DKAQ IK+FMRRNGCEPDLVTY
Sbjct: 206 LIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTY 258



 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 68/243 (27%), Positives = 101/243 (41%), Gaps = 70/243 (28%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTM---- 168
           LISG C+   +   + +   M +    PD+  YN++LN  C E  LD A ++LK M    
Sbjct: 226 LISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSG 285

Query: 169 --------------YCKGSEPD-----------------VVTYTTIIDGFCKFGRYESAV 255
                          CKG+ PD                 VV+Y TII  FCK G   SA 
Sbjct: 286 IEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAY 345

Query: 256 EIWHEMVGRGFSPDVVACG-----------------------------------ALVFGL 330
           +++ EM  +G  PDVV                                       ++  L
Sbjct: 346 KLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHL 405

Query: 331 CERGKVDLAYELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDL 510
           C+ GKV++A+ +   M++  +   +  +NALI+GFC+  RV +A  +   M+  G  PD 
Sbjct: 406 CKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDE 465

Query: 511 VTY 519
           VTY
Sbjct: 466 VTY 468



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVP-DIWAYNIYLNVLCKEERLDTAIEVLKTMYCK 177
           ++ GLC  R + L   L+ D+ K   V      YN  ++  C+  R+D A  +   M   
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRN 249

Query: 178 GSEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLA 357
           G EPD+VTY   ++ FC     + A ++   M   G  PDV +   L+ G+C+    D A
Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKA 309

Query: 358 YELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
           Y L    M  +    +  YN +I  FC+ G    A  +   M + G  PD+VT+
Sbjct: 310 YLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTF 363



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/165 (28%), Positives = 78/165 (47%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           +I   CK+ +     +L  +M +  + PD+  + I++     +   + A ++L  M   G
Sbjct: 331 IIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG 390

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAY 360
             PD + YTTIID  CK G+ E A  I+ +MV +G SPDV++  AL+ G C+  +V  A 
Sbjct: 391 LSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAM 450

Query: 361 ELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNG 495
            L   M           Y  +I G  +  ++  A ++   M   G
Sbjct: 451 HLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKG 495



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/135 (29%), Positives = 68/135 (50%)
 Frame = +1

Query: 28  NLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKGSEPDVVTYT 207
           +  + ++LL  M ++ L PD   Y   ++ LCK  +++ A  +   M  +G  PDV+++ 
Sbjct: 375 SFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFN 434

Query: 208 TIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAYELTLGMMKH 387
            +I+GFCK  R   A+ ++ EM  RG  PD V    ++ GL E  K+ +A  +   MM  
Sbjct: 435 ALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDK 494

Query: 388 QVEFSISVYNALISG 432
                 ++   LI G
Sbjct: 495 GFTLDRAIAQTLIRG 509



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/109 (30%), Positives = 56/109 (51%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           +I  LCK   + +   +  DM +  + PD+ ++N  +N  CK  R+  A+ + + M  +G
Sbjct: 401 IIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRG 460

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFG 327
           S PD VTY  II G  +  +   A  +W +M+ +GF+ D      L+ G
Sbjct: 461 SYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509


>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
           gi|449494962|ref|XP_004159696.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  213 bits (543), Expect = 1e-53
 Identities = 98/172 (56%), Positives = 131/172 (76%)
 Frame = +1

Query: 4   ISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKGS 183
           IS LC+++N GLI RLL DM +L  +PDIWA+NIYLN+L +E  L+ A++    M  KG 
Sbjct: 86  ISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGR 145

Query: 184 EPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAYE 363
           EPDVVTYT I+D  CK  +Y+ AVE W  MV +G SPD+ AC ALV GLC+ GKVDLAYE
Sbjct: 146 EPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYE 205

Query: 364 LTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
           LT+G MK +++F+  ++N+L+SGFC++GR+ KA  IK+FM ++GCEPDL+TY
Sbjct: 206 LTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITY 257



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           L++  C    L L  + +  M+++ + PD+++YN  L  LCK  RLD A +++ TM+ KG
Sbjct: 260 LLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKG 319

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLA- 357
              D V+Y T+I   CK      A  ++ EM  +  +PDV     L+      G   +A 
Sbjct: 320 L-CDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAK 378

Query: 358 ------------------------------YELTLGMMKHQVEFSISV----YNALISGF 435
                                          E+  G+ +  +E  IS     YNALI+G 
Sbjct: 379 GLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGL 438

Query: 436 CQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
           C+A +V +A ++   M+  GC PD VT+
Sbjct: 439 CKASKVSEAMLLYEEMQIRGCYPDEVTF 466



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 51/173 (29%), Positives = 77/173 (44%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           L+SG CK   +     +   M K    PD+  YNI LN  C    L+ A + +K M   G
Sbjct: 225 LMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIG 284

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAY 360
            EPDV +Y  ++ G CK  R + A ++ + M  +G   D V+   ++  LC+      AY
Sbjct: 285 MEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLC-DTVSYNTVIGALCKSFATRKAY 343

Query: 361 ELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
            L   M +  V   +  +  LI  F   G    A+ +   M +    PDL+ Y
Sbjct: 344 RLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFY 396



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/173 (27%), Positives = 82/173 (47%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           L+ GLC    + L   L     K  +  +   +N  ++  CK  R+  A+ +   M   G
Sbjct: 190 LVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHG 249

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAY 360
            EPD++TY  +++ FC     E A +   +M   G  PDV +   L+ GLC+  ++D AY
Sbjct: 250 CEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAY 309

Query: 361 ELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
           +L   M +  +  ++S YN +I   C++    KA  +   M +    PD+ T+
Sbjct: 310 KLMNTMWEKGLCDTVS-YNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTF 361



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/112 (32%), Positives = 60/112 (53%)
 Frame = +1

Query: 49  LLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKGSEPDVVTYTTIIDGFC 228
           LL  M +  L+PD+  Y   ++  CK  +++ A  V + M   G  PDVV+Y  +I+G C
Sbjct: 380 LLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLC 439

Query: 229 KFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAYELTLGMMK 384
           K  +   A+ ++ EM  RG  PD V    ++ GL  + ++ LA ++   MM+
Sbjct: 440 KASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMME 491



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/113 (26%), Positives = 59/113 (52%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           ++   CK R + + + +  DM ++ + PD+ +YN  +N LCK  ++  A+ + + M  +G
Sbjct: 399 VVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRG 458

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCER 339
             PD VT+  II G  +      A ++W +M+ +G++ D      L+  +  R
Sbjct: 459 CYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAIRSR 511



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 46/173 (26%), Positives = 77/173 (44%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           ++  LCK +           M    L PD+ A    +  LC   ++D A E+        
Sbjct: 155 IVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGE 214

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAY 360
            + + + + +++ GFCK GR   A+ I   M   G  PD++    L+   C+   ++LA 
Sbjct: 215 MKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAG 274

Query: 361 ELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
           +    M +  +E  +  YN L+ G C+A R+DKA  +   M   G   D V+Y
Sbjct: 275 KSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSY 326


>ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  203 bits (516), Expect = 1e-50
 Identities = 99/175 (56%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
 Frame = +1

Query: 4   ISGLCKVRN---LGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYC 174
           IS LC   N   L LI  LL DMD L  VPDIWA+N YLN+LC++ RL+TA+E+  +M  
Sbjct: 88  ISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPS 147

Query: 175 KGSEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDL 354
           KG +PDVV+YT IID  C   R++ A ++W  ++ +G SPD  AC ALV GLC  G+VDL
Sbjct: 148 KGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDL 207

Query: 355 AYELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
           AYEL +G++K  V+ +  VYNALI GFC+ GRVDKA  IKAFM R GC PDLVTY
Sbjct: 208 AYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTY 262



 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 68/243 (27%), Positives = 101/243 (41%), Gaps = 70/243 (28%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           LI G C++  +    ++   M +   VPD+  YNI LN  C+E  +D A+ +++TM   G
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289

Query: 181 SEPD-----------------------------------VVTYTTIIDGFCKFGRYESAV 255
            EPD                                   VV+Y T+I  FCK  R     
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGY 349

Query: 256 EIWHEMVGRGFSPDVVACG-----------------------------------ALVFGL 330
           E++ EM G+G  PD+V                                      A+V  L
Sbjct: 350 ELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHL 409

Query: 331 CERGKVDLAYELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDL 510
           C+ GKVD+A+ +   M+++ V   +  YNAL++GFC+  RV  A  +   M+  G  PD 
Sbjct: 410 CKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDE 469

Query: 511 VTY 519
           VTY
Sbjct: 470 VTY 472



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/173 (28%), Positives = 85/173 (49%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           L+ GLC    + L   L+  + K  +  +   YN  ++  C+  R+D A+++   M   G
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAY 360
             PD+VTY  +++  C+ G  + AV +   M   G  PD+ +   L+ G C+   VD A+
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAH 314

Query: 361 ELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
            + +  M+ +    +  YN +I+ FC+A R  K   +   M   G  PD+VT+
Sbjct: 315 LMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTF 367



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/128 (32%), Positives = 69/128 (53%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           LI    +  +  ++++LL +M K+ ++PD   Y   ++ LCK  ++D A  V + M   G
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAY 360
             PDV++Y  +++GFCK  R   A+ ++ EM  +G  PD V    +V GL    K+ LA 
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489

Query: 361 ELTLGMMK 384
            +   MM+
Sbjct: 490 RVWDQMME 497



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/97 (31%), Positives = 50/97 (51%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           ++  LCK   + +   +  DM +  + PD+ +YN  LN  CK  R+  A+ +   M  KG
Sbjct: 405 VVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKG 464

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFS 291
             PD VTY  I+ G  +  +   A  +W +M+ RGF+
Sbjct: 465 LYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFT 501


>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  197 bits (502), Expect = 6e-49
 Identities = 96/173 (55%), Positives = 126/173 (72%), Gaps = 1/173 (0%)
 Frame = +1

Query: 4   ISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKGS 183
           ISGLC+ +    I+ LL DM+KL  VPDIWA+NIYLN+L +E R ++A+EV   M  +G 
Sbjct: 86  ISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGR 145

Query: 184 EPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAYE 363
           EPDVVT+T IIDG CK  ++++AV+ W  M+ +G  PD  AC AL  GLC+ G+VDLAYE
Sbjct: 146 EPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYE 205

Query: 364 LTLGMMKHQV-EFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDLVTY 519
           L +G++   + E S  VYNALISGFC+AGR+DKA  + +FM R GC+PDLVTY
Sbjct: 206 LIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTY 258



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 64/243 (26%), Positives = 97/243 (39%), Gaps = 70/243 (28%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           LISG C+   +     ++  M +    PD+  YN+ LN  C E   + A+++LK M C  
Sbjct: 226 LISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSA 285

Query: 181 SEPDV-----------------------------------VTYTTIIDGFCKFGRYESAV 255
            EPDV                                   V+Y TII  FC       A 
Sbjct: 286 IEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAY 345

Query: 256 EIWHEMVGRGFSPDVVACGALV---------------------FGL-------------- 330
           +++ EM  +G +PDVV    L+                      GL              
Sbjct: 346 KLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHH 405

Query: 331 CERGKVDLAYELTLGMMKHQVEFSISVYNALISGFCQAGRVDKAQVIKAFMRRNGCEPDL 510
           C+ GKV++A+ +   M++  +   +  YNALI+GFC++ RV +   +   M + G  PD 
Sbjct: 406 CKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDE 465

Query: 511 VTY 519
           VTY
Sbjct: 466 VTY 468



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           +I   C + N     +L  +M +  + PD+  + I +    +E   D A ++L  M   G
Sbjct: 331 IIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMG 390

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCER---GKVD 351
             PD + YTTIID  CK G+ E A  I+ +MV +G +PDVV+  AL+ G C+    G+V 
Sbjct: 391 LLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVM 450

Query: 352 LAYE--LTLGMMKHQVEFSISV 411
             YE  L  G    +V + + +
Sbjct: 451 HLYEQMLQRGSFPDEVTYKLII 472



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/141 (28%), Positives = 67/141 (47%)
 Frame = +1

Query: 97  YNIYLNVLCKEERLDTAIEVLKTMYCKGSEPDVVTYTTIIDGFCKFGRYESAVEIWHEMV 276
           YN  ++  C+  R+D A+ ++  M   G +PD+VTY  +++  C    +E AV++  +M 
Sbjct: 223 YNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKME 282

Query: 277 GRGFSPDVVACGALVFGLCERGKVDLAYELTLGMMKHQVEFSISVYNALISGFCQAGRVD 456
                PDV +   L+   C+    D AY   +  M  +    +  YN +I  FC      
Sbjct: 283 CSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNR 342

Query: 457 KAQVIKAFMRRNGCEPDLVTY 519
           +A  +   M R G  PD+VT+
Sbjct: 343 RAYKLFEEMGRKGIAPDVVTF 363



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/143 (27%), Positives = 68/143 (47%)
 Frame = +1

Query: 1   LISGLCKVRNLGLIERLLHDMDKLALVPDIWAYNIYLNVLCKEERLDTAIEVLKTMYCKG 180
           LI    +  N  + ++LL  M  + L+PD   Y   ++  CK  +++ A  +   M  KG
Sbjct: 366 LIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKG 425

Query: 181 SEPDVVTYTTIIDGFCKFGRYESAVEIWHEMVGRGFSPDVVACGALVFGLCERGKVDLAY 360
             PDVV+Y  +I+GFCK  R    + ++ +M+ RG  PD V    ++  L    K+  A 
Sbjct: 426 ITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDAC 485

Query: 361 ELTLGMMKHQVEFSISVYNALIS 429
            +   MM+  +     +   LI+
Sbjct: 486 RVWDQMMERGLTLDRGISEMLIN 508