BLASTX nr result

ID: Coptis24_contig00031459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031459
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516528.1| tryptophanyl-tRNA synthetase, putative [Rici...   237   1e-60
ref|XP_002304617.1| predicted protein [Populus trichocarpa] gi|2...   234   6e-60
ref|XP_004136227.1| PREDICTED: tryptophan--tRNA ligase-like [Cuc...   233   2e-59
ref|XP_003523753.1| PREDICTED: tryptophanyl-tRNA synthetase-like...   229   3e-58
ref|XP_003527850.1| PREDICTED: tryptophanyl-tRNA synthetase-like...   227   1e-57

>ref|XP_002516528.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
           gi|223544348|gb|EEF45869.1| tryptophanyl-tRNA
           synthetase, putative [Ricinus communis]
          Length = 412

 Score =  237 bits (605), Expect = 1e-60
 Identities = 122/160 (76%), Positives = 137/160 (85%), Gaps = 15/160 (9%)
 Frame = -2

Query: 439 YLKS---LGQN-RLPNSFRCNCT-----------TTNSVKKRIVSGVQPTGSVHLGNYLG 305
           YLKS   + QN R   +FRC+C+           ++++VKKRIVSGVQPTGS+HLGNYLG
Sbjct: 32  YLKSPRLISQNARHAAAFRCHCSVSAAQPDAPASSSSAVKKRIVSGVQPTGSIHLGNYLG 91

Query: 304 AIKSWVSLQNTYETLFFIVDLHAITLPYDAQQLAKATRTTAAIYLACGVDISKASVFVQS 125
           AIK+W++LQNTYETLFFIVDLHAITLPYD  QL+KATR TAAIYLACGVD S+ASVFVQS
Sbjct: 92  AIKNWIALQNTYETLFFIVDLHAITLPYDTPQLSKATRNTAAIYLACGVDNSRASVFVQS 151

Query: 124 HVRAHVELMWLLSSATPIGWLNKMIQFKEKSRKAGDENVG 5
           HVRAHVELMWLLSSATPIGWLN+MIQFKEKSRKAGDENVG
Sbjct: 152 HVRAHVELMWLLSSATPIGWLNRMIQFKEKSRKAGDENVG 191


>ref|XP_002304617.1| predicted protein [Populus trichocarpa] gi|222842049|gb|EEE79596.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  234 bits (598), Expect = 6e-60
 Identities = 116/151 (76%), Positives = 128/151 (84%), Gaps = 13/151 (8%)
 Frame = -2

Query: 418 NRLPNSFRCNCTTTNS-------------VKKRIVSGVQPTGSVHLGNYLGAIKSWVSLQ 278
           ++  N FRC C  ++S             VKKRIVSGVQPTGSVHLGNYLGAIK+W++LQ
Sbjct: 32  SKYSNGFRCYCDVSHSQQTSPENSPTSVTVKKRIVSGVQPTGSVHLGNYLGAIKNWIALQ 91

Query: 277 NTYETLFFIVDLHAITLPYDAQQLAKATRTTAAIYLACGVDISKASVFVQSHVRAHVELM 98
           NTYETLFFIVDLHAITLPYD ++L+KATR TAAIYLACG+D SKASVFVQSHV AHVELM
Sbjct: 92  NTYETLFFIVDLHAITLPYDTKELSKATRDTAAIYLACGIDASKASVFVQSHVHAHVELM 151

Query: 97  WLLSSATPIGWLNKMIQFKEKSRKAGDENVG 5
           WLLSSATPIGWLN+MIQFKEKSRKAGDENVG
Sbjct: 152 WLLSSATPIGWLNRMIQFKEKSRKAGDENVG 182


>ref|XP_004136227.1| PREDICTED: tryptophan--tRNA ligase-like [Cucumis sativus]
          Length = 414

 Score =  233 bits (593), Expect = 2e-59
 Identities = 117/153 (76%), Positives = 129/153 (84%), Gaps = 12/153 (7%)
 Frame = -2

Query: 427 LGQNRLPNSFRCNCTTT------------NSVKKRIVSGVQPTGSVHLGNYLGAIKSWVS 284
           L ++   NS RC C  +            +S+K+RIVSGVQPTGS+HLGNYLGAIK+W+S
Sbjct: 41  LNRSSTGNSSRCCCGISLTEPAAAPERPPSSIKRRIVSGVQPTGSIHLGNYLGAIKNWIS 100

Query: 283 LQNTYETLFFIVDLHAITLPYDAQQLAKATRTTAAIYLACGVDISKASVFVQSHVRAHVE 104
           LQ+TY+TLFFIVDLHAITLPYD QQL KATR TAAIYLACGVD SKASVFVQSHVRAHVE
Sbjct: 101 LQDTYDTLFFIVDLHAITLPYDTQQLHKATRDTAAIYLACGVDTSKASVFVQSHVRAHVE 160

Query: 103 LMWLLSSATPIGWLNKMIQFKEKSRKAGDENVG 5
           LMWLLSSATPIGWLN+MIQFKEKSRKAGDENVG
Sbjct: 161 LMWLLSSATPIGWLNRMIQFKEKSRKAGDENVG 193


>ref|XP_003523753.1| PREDICTED: tryptophanyl-tRNA synthetase-like [Glycine max]
          Length = 398

 Score =  229 bits (584), Expect = 3e-58
 Identities = 111/126 (88%), Positives = 118/126 (93%)
 Frame = -2

Query: 382 TTNSVKKRIVSGVQPTGSVHLGNYLGAIKSWVSLQNTYETLFFIVDLHAITLPYDAQQLA 203
           T  SVKKR+VSGVQPTGS+HLGNY GAIK+WV+LQN Y+TLFFIVDLHAITLPYD QQL+
Sbjct: 46  TPTSVKKRVVSGVQPTGSIHLGNYFGAIKNWVALQNVYDTLFFIVDLHAITLPYDTQQLS 105

Query: 202 KATRTTAAIYLACGVDISKASVFVQSHVRAHVELMWLLSSATPIGWLNKMIQFKEKSRKA 23
           KATR+TAAIYLACGVD SKASVFVQSHVRAHVELMWLLSS TPIGWLNKMIQFKEKSRKA
Sbjct: 106 KATRSTAAIYLACGVDPSKASVFVQSHVRAHVELMWLLSSTTPIGWLNKMIQFKEKSRKA 165

Query: 22  GDENVG 5
           GDE VG
Sbjct: 166 GDEEVG 171


>ref|XP_003527850.1| PREDICTED: tryptophanyl-tRNA synthetase-like [Glycine max]
          Length = 393

 Score =  227 bits (578), Expect = 1e-57
 Identities = 110/126 (87%), Positives = 117/126 (92%)
 Frame = -2

Query: 382 TTNSVKKRIVSGVQPTGSVHLGNYLGAIKSWVSLQNTYETLFFIVDLHAITLPYDAQQLA 203
           T   VKKR+VSGVQPTGS+HLGNY GAIK+WV+LQN Y+TLFFIVDLHAITLPYD QQL+
Sbjct: 46  TPTFVKKRVVSGVQPTGSIHLGNYFGAIKNWVALQNVYDTLFFIVDLHAITLPYDTQQLS 105

Query: 202 KATRTTAAIYLACGVDISKASVFVQSHVRAHVELMWLLSSATPIGWLNKMIQFKEKSRKA 23
           KATR+TAAIYLACGVD SKASVFVQSHVRAHVELMWLLSS TPIGWLNKMIQFKEKSRKA
Sbjct: 106 KATRSTAAIYLACGVDPSKASVFVQSHVRAHVELMWLLSSTTPIGWLNKMIQFKEKSRKA 165

Query: 22  GDENVG 5
           GDE VG
Sbjct: 166 GDEEVG 171


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