BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031455
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                95   7e-18
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            94   1e-17
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    94   1e-17
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        91   9e-17

>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 54/152 (35%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
 Frame = -1

Query: 554 KICNDFLWXXXXXXXXXXXXX*LKTALPKNEGGLNIMELRIWNKASYCGLVYKIVTKGES 375
           K+C+ FLW                   PK EGGL +  L+  N  S   LV++I++   S
Sbjct: 488 KLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNS 547

Query: 374 LWTKWVWNQHIKGKKFWHMKVPQDC-SWVWRNILQI*KVASKFIRYIIGSGRNIEVWYEP 198
           LWTKWV    I+ K  W +K      SW+WR IL+I  VA  F R  +G+G +   WY+ 
Sbjct: 548 LWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDH 607

Query: 197 WCSDNILINDQVAKN--QLHLPLEAKVSDLIT 108
           W +   LI+    K    L +P EA V+D  T
Sbjct: 608 WSAHGRLIDTVGDKGTIDLGIPREASVADAWT 639


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
 Frame = -1

Query: 551  ICNDFLWXXXXXXXXXXXXX*LKTALPKNEGGLNIMELRIWNKASYCGLVYKIVTKGESL 372
            +C+ FLW              +   LPK+EGGL       WNK     L++ +  +  SL
Sbjct: 695  LCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSL 754

Query: 371  WTKWVWNQHIKGKKFWHMKVPQDCSWVWRNILQI*KVASKFIRYIIGSGRNIEVWYEPWC 192
            W +W  +  +    FW +   Q   W W+ +L +  +A KFI+  +G+G  +  W++ W 
Sbjct: 755  WAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWT 814

Query: 191  SDNILIN--DQVAKNQLHLPLEAKVSDLITDGVWNSNVHSLQEGELKRKILSTEICNHL 21
            S   LI     V    L +P  AKV+D I    W           L R + +  I +HL
Sbjct: 815  SLGPLIKYLGDVGSRPLRIPFSAKVADAIDGSGWRL--------PLSRSLTADSILSHL 865


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
 Frame = -1

Query: 551  ICNDFLWXXXXXXXXXXXXX*LKTALPKNEGGLNIMELRIWNKASYCGLVYKIVTKGESL 372
            +C+ FLW              +   LPK+EGGL       WNK     L++ +  +  SL
Sbjct: 695  LCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSL 754

Query: 371  WTKWVWNQHIKGKKFWHMKVPQDCSWVWRNILQI*KVASKFIRYIIGSGRNIEVWYEPWC 192
            W +W  +  +    FW +   Q   W W+ +L +  +A KFI+  +G+G  +  W++ W 
Sbjct: 755  WAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWT 814

Query: 191  SDNILIN--DQVAKNQLHLPLEAKVSDLITDGVWNSNVHSLQEGELKRKILSTEICNHL 21
            S   LI     V    L +P  AKV+D I    W           L R + +  I +HL
Sbjct: 815  SLGPLIKYLGDVGSRPLRIPFSAKVADAIDGSGWRL--------PLSRSLTADSILSHL 865


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
 Frame = -1

Query: 554 KICNDFLWXXXXXXXXXXXXX*LKTALPKNEGGLNIMELRIWNKASYCGLVYKIVTKGE- 378
           +I   FLW               +  LPK EGGL I  ++ WNK +    ++ +    + 
Sbjct: 128 QIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDG 187

Query: 377 SLWTKWVWNQHIKGKKFWHMKVPQDCSWVWRNILQI*KVASKFIRYIIGSGRNIEVWYEP 198
           S+W+ W+ +  ++G+ FW +K PQ+CSW W  IL++  +A   ++YIIG G    +W++ 
Sbjct: 188 SIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDN 247

Query: 197 W---------CSDNILINDQVAKNQLHLPLEAKVSDLITDGVWNS 90
           W           +  + +  +AKN       AKV+ LI +  W +
Sbjct: 248 WHPHSPLADSYGERFIYDSGMAKN-------AKVNVLIQNSEWKT 285


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
 Frame = -1

Query: 551  ICNDFLWXXXXXXXXXXXXX*LKTALPKNEGGLNIMELRIWNKASYCGLVYKIVTKGESL 372
            +C+ FLW                  LPK+EGGL +  L  WNK     L++++    +SL
Sbjct: 835  LCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSL 894

Query: 371  WTKWVWNQHIKGKKFWHMKVPQDCSWVWRNILQI*KVASKFIRYIIGSGRNIEVWYEPWC 192
            W  W    H+    FW ++  Q  SW W+ +L +  +A +F+   +G+G   + WY+ W 
Sbjct: 895  WADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWT 954

Query: 191  SDNIL--INDQVAKNQLHLPLEAKVSDLITDGVW 96
            S   L  I   +  + L +PL AKV+   ++  W
Sbjct: 955  SLGPLFRIIGDIGPSSLRVPLLAKVASAFSEDGW 988