BLASTX nr result

ID: Coptis24_contig00031453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031453
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]   121   7e-26
emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]   119   3e-25
emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]   119   3e-25
ref|XP_002284948.2| PREDICTED: 39S ribosomal protein L45, mitoch...   116   2e-24
emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]   116   2e-24

>emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]
          Length = 501

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/99 (54%), Positives = 68/99 (68%)
 Frame = -1

Query: 298 RHRFHLVRWDRVCKPKEDGGLGIRSLRQFNQALLGKWLWRFGEDRESLWRKVIVSQFGER 119
           R R HLVRW  +CK K+ GGLG+R L++FN ALLGKWLWRF  +RESLWRKVIV +FGE 
Sbjct: 130 RRRIHLVRWTAICKDKKYGGLGLRHLKEFNHALLGKWLWRFSLERESLWRKVIVGKFGEG 189

Query: 118 NGGWESGLVHTAYGCGIWKGIQKVRKFFLKNIGYNLGSG 2
            GGW +  V  +YG  +WK I+K  + F       +G+G
Sbjct: 190 EGGWTTREVRESYGMSLWKDIRKGWEEFFLRTSIGIGNG 228


>emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]
          Length = 1241

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/100 (53%), Positives = 68/100 (68%)
 Frame = -1

Query: 301 DRHRFHLVRWDRVCKPKEDGGLGIRSLRQFNQALLGKWLWRFGEDRESLWRKVIVSQFGE 122
           +R + HLVRW  +CK K  G LG+R L+ FN ALLGKWLWRF  +RES WRKVIV +FGE
Sbjct: 414 ERRKIHLVRWAVICKDKRHGELGLRHLKVFNHALLGKWLWRFPLERESFWRKVIVGKFGE 473

Query: 121 RNGGWESGLVHTAYGCGIWKGIQKVRKFFLKNIGYNLGSG 2
             GGW + +V  +YG G+WK I+K  + FL      +G+G
Sbjct: 474 EEGGWTTRVVRESYGMGLWKDIKKGWEEFLLRTSIRIGNG 513


>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = -1

Query: 298 RHRFHLVRWDRVCKPKEDGGLGIRSLRQFNQALLGKWLWRFGEDRESLWRKVIVSQFGER 119
           R R HLVRW  +CK K+ GGLG+R L++FN ALLGKWLWRF  +RES WRKVIV +FGE 
Sbjct: 472 RRRIHLVRWTAICKDKKYGGLGLRHLKEFNHALLGKWLWRFSLERESFWRKVIVGKFGEG 531

Query: 118 NGGWESGLVHTAYGCGIWKGIQK-VRKFFLK 29
            GGW +  V  +YG  +WK I+K   +FFLK
Sbjct: 532 EGGWTTREVRESYGMSLWKDIRKGWEEFFLK 562


>ref|XP_002284948.2| PREDICTED: 39S ribosomal protein L45, mitochondrial-like [Vitis
           vinifera]
          Length = 379

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/100 (52%), Positives = 67/100 (67%)
 Frame = -1

Query: 301 DRHRFHLVRWDRVCKPKEDGGLGIRSLRQFNQALLGKWLWRFGEDRESLWRKVIVSQFGE 122
           +R + HLVRW  +CK K  GGLG+R L+ FN ALLGKWLWRF  +RES WR+VIV +FGE
Sbjct: 3   ERRKIHLVRWAVICKEKRHGGLGLRYLKDFNHALLGKWLWRFPIERESFWRRVIVGKFGE 62

Query: 121 RNGGWESGLVHTAYGCGIWKGIQKVRKFFLKNIGYNLGSG 2
             GGW +  V  +YG G+WK I+K  + F       +G+G
Sbjct: 63  VQGGWTTREVRESYGTGLWKDIRKGWEEFFLRTRIRIGNG 102


>emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]
          Length = 489

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/100 (52%), Positives = 67/100 (67%)
 Frame = -1

Query: 301 DRHRFHLVRWDRVCKPKEDGGLGIRSLRQFNQALLGKWLWRFGEDRESLWRKVIVSQFGE 122
           +R + HLVRW  +CK K  GGLG+R L+ FN ALLGKWLWRF  +RES WR+VIV +FGE
Sbjct: 3   ERRKIHLVRWAVICKDKRHGGLGLRYLKDFNHALLGKWLWRFPIERESFWRRVIVGKFGE 62

Query: 121 RNGGWESGLVHTAYGCGIWKGIQKVRKFFLKNIGYNLGSG 2
             GGW +  V  +YG G+WK I+K  + F       +G+G
Sbjct: 63  VQGGWTTREVRESYGTGLWKDIRKGWEEFFLRTRIRIGNG 102


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