BLASTX nr result

ID: Coptis24_contig00031431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031431
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|2...   304   7e-81
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   303   2e-80
emb|CBI40843.3| unnamed protein product [Vitis vinifera]              301   6e-80
ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like ...   294   7e-78
ref|XP_002533644.1| conserved hypothetical protein [Ricinus comm...   294   7e-78

>ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|222865257|gb|EEF02388.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  304 bits (779), Expect = 7e-81
 Identities = 144/201 (71%), Positives = 163/201 (81%)
 Frame = -3

Query: 603 NGTSFVSTGIPDLDKILGGGFHLGSLVMIMEDGEAPHHLLLLRNFMSQGLVHNQPLLYAS 424
           NGT FVS+GIPDLDKILGGGF LGSLVMIMED EAPHH+LLLRNFMSQGLV NQPLLYAS
Sbjct: 31  NGTFFVSSGIPDLDKILGGGFPLGSLVMIMEDAEAPHHMLLLRNFMSQGLVQNQPLLYAS 90

Query: 423 PSNDPKSFLGTLPSPVSPKDDKSRGPETEQEKGLRIAWQYRKYFGENQLNNENNKDAKKE 244
           P+ DP+ FLGTLP P S KDDKSR  +TEQEKGLRIAWQY+KYF ENQ N +++KD+ +E
Sbjct: 91  PAKDPRGFLGTLPCPSSSKDDKSRNHDTEQEKGLRIAWQYKKYFSENQKNIDDHKDSNQE 150

Query: 243 YCNEFDLRKPLKVPSLGAQHIDCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGRIA 64
           +CN+FDLRKPL+      Q +DC SI +SPNL    DRC+TFLAQ PRND    C GRIA
Sbjct: 151 FCNDFDLRKPLEKHFYSGQRVDCVSIKDSPNLATLHDRCATFLAQFPRNDGSFSCMGRIA 210

Query: 63  IQSLCAPQCGYSDTEWDVLSF 1
           IQSLCAPQC  S  +WD+LSF
Sbjct: 211 IQSLCAPQCELSKMDWDMLSF 231


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  303 bits (775), Expect = 2e-80
 Identities = 144/201 (71%), Positives = 167/201 (83%)
 Frame = -3

Query: 603 NGTSFVSTGIPDLDKILGGGFHLGSLVMIMEDGEAPHHLLLLRNFMSQGLVHNQPLLYAS 424
           NGT F+S+GIPDLDKILGGGF LGSLVM+MED EAPHH+LLLRNFMSQGLVHNQPLLYAS
Sbjct: 31  NGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHHMLLLRNFMSQGLVHNQPLLYAS 90

Query: 423 PSNDPKSFLGTLPSPVSPKDDKSRGPETEQEKGLRIAWQYRKYFGENQLNNENNKDAKKE 244
           PS DP++FLGTLPSPV  KDD+S   + EQEKGLRIAWQY+KYFGE+Q N ++++D K E
Sbjct: 91  PSKDPRAFLGTLPSPVLSKDDRSHNRDPEQEKGLRIAWQYKKYFGEHQPNFDSHRDTKHE 150

Query: 243 YCNEFDLRKPLKVPSLGAQHIDCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGRIA 64
           YCN+FDLRKPL+   L AQ+I C SI + PNL A RD C+ FLAQ  RN+  I CAGR+A
Sbjct: 151 YCNDFDLRKPLERXFLTAQNICCLSIQDPPNLAAXRDCCAKFLAQFSRNNSSISCAGRVA 210

Query: 63  IQSLCAPQCGYSDTEWDVLSF 1
           IQS CAPQC YS+ EWD+LSF
Sbjct: 211 IQSFCAPQCEYSNMEWDMLSF 231


>emb|CBI40843.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  301 bits (771), Expect = 6e-80
 Identities = 146/203 (71%), Positives = 169/203 (83%), Gaps = 2/203 (0%)
 Frame = -3

Query: 603 NGTSFVSTGIPDLDKILGGGFHLGSLVMIMEDGEAPHHLLLLRNFMSQGLVHNQPLLYAS 424
           NGT F+S+GIPDLDKILGGGF LGSLVM+MED EAPHH+LLLRNFMSQGLVHNQPLLYAS
Sbjct: 28  NGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHHMLLLRNFMSQGLVHNQPLLYAS 87

Query: 423 PSNDPKSFLGTLPSPVSPKDDKS--RGPETEQEKGLRIAWQYRKYFGENQLNNENNKDAK 250
           PS DP++FLGTLPSPV  KDD+S  R PE  QEKGLRIAWQY+KYFGE++ N ++++D K
Sbjct: 88  PSKDPRAFLGTLPSPVLSKDDRSHNRDPEQLQEKGLRIAWQYKKYFGEHRPNFDSHRDTK 147

Query: 249 KEYCNEFDLRKPLKVPSLGAQHIDCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGR 70
            EYCN+FDLRKPL+   L AQ+I C SI + PNL AFRD C+ FLAQ  RN+  I CAGR
Sbjct: 148 HEYCNDFDLRKPLERYFLTAQNICCLSIQDPPNLAAFRDCCAKFLAQFSRNNSSISCAGR 207

Query: 69  IAIQSLCAPQCGYSDTEWDVLSF 1
           +AIQS CAPQC YS+ EWD+LSF
Sbjct: 208 VAIQSFCAPQCEYSNMEWDMLSF 230


>ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like [Vitis vinifera]
          Length = 361

 Score =  294 bits (753), Expect = 7e-78
 Identities = 142/201 (70%), Positives = 166/201 (82%)
 Frame = -3

Query: 603 NGTSFVSTGIPDLDKILGGGFHLGSLVMIMEDGEAPHHLLLLRNFMSQGLVHNQPLLYAS 424
           NGT F+S+GIPDLDKILGGGF LGSLVM+MED EAPHH+LLLRNFMSQGLVHNQPLLYAS
Sbjct: 31  NGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHHMLLLRNFMSQGLVHNQPLLYAS 90

Query: 423 PSNDPKSFLGTLPSPVSPKDDKSRGPETEQEKGLRIAWQYRKYFGENQLNNENNKDAKKE 244
           PS DP++FLGTLPSPV  KDD+S   + EQ  GLRIAWQY+KYFGE++ N ++++D K E
Sbjct: 91  PSKDPRAFLGTLPSPVLSKDDRSHNRDPEQ--GLRIAWQYKKYFGEHRPNFDSHRDTKHE 148

Query: 243 YCNEFDLRKPLKVPSLGAQHIDCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGRIA 64
           YCN+FDLRKPL+   L AQ+I C SI + PNL AFRD C+ FLAQ  RN+  I CAGR+A
Sbjct: 149 YCNDFDLRKPLERYFLTAQNICCLSIQDPPNLAAFRDCCAKFLAQFSRNNSSISCAGRVA 208

Query: 63  IQSLCAPQCGYSDTEWDVLSF 1
           IQS CAPQC YS+ EWD+LSF
Sbjct: 209 IQSFCAPQCEYSNMEWDMLSF 229


>ref|XP_002533644.1| conserved hypothetical protein [Ricinus communis]
           gi|223526457|gb|EEF28732.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  294 bits (753), Expect = 7e-78
 Identities = 139/201 (69%), Positives = 162/201 (80%)
 Frame = -3

Query: 603 NGTSFVSTGIPDLDKILGGGFHLGSLVMIMEDGEAPHHLLLLRNFMSQGLVHNQPLLYAS 424
           NGT FVS+GI DLDKILGGG  LGSLVM+MED EAPHH+LLLRNFMSQGL+ NQPLLY+S
Sbjct: 31  NGTFFVSSGISDLDKILGGGIPLGSLVMVMEDAEAPHHMLLLRNFMSQGLIQNQPLLYSS 90

Query: 423 PSNDPKSFLGTLPSPVSPKDDKSRGPETEQEKGLRIAWQYRKYFGENQLNNENNKDAKKE 244
           PS +P+ FLGTLPSP S KDDK R    E+EKGLRIAWQY+KYFGENQ   + ++D+K+E
Sbjct: 91  PSKEPRVFLGTLPSPSSSKDDKLRKHHPEEEKGLRIAWQYKKYFGENQQTFDGHRDSKQE 150

Query: 243 YCNEFDLRKPLKVPSLGAQHIDCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGRIA 64
           +CN+FDLRKPL+      Q +DC S+ +SPNL   +DRCS FLAQ PRND GI   GRIA
Sbjct: 151 FCNDFDLRKPLERHFFSGQRVDCVSVNDSPNLATLQDRCSAFLAQFPRNDGGISSIGRIA 210

Query: 63  IQSLCAPQCGYSDTEWDVLSF 1
           IQSLCAPQC YS+ EW+VLSF
Sbjct: 211 IQSLCAPQCEYSNKEWEVLSF 231


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