BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031408
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28998.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_004173450.1| PREDICTED: pentatricopeptide repeat-containi...   128   6e-28
ref|XP_004171410.1| PREDICTED: pentatricopeptide repeat-containi...   128   6e-28
ref|XP_004147136.1| PREDICTED: pentatricopeptide repeat-containi...   128   6e-28

>emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/110 (68%), Positives = 89/110 (80%)
 Frame = -2

Query: 509 SHLGLVELGCSFFDSISSVYKMVPSEENFGSLVDLFSRNGFLEEAKHVLEVMPFAPWPAV 330
           SHLGLVE G  FF S++  Y M PS +N+G LVDLFSRNGFLE+AKH++E MPF PWPA+
Sbjct: 599 SHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAI 658

Query: 329 WRSILNGCRIHGNRNLGEWASKHLLQLVPKNDAAYVLLSVKA*GKCDWSN 180
           WRS+LNGCRIHGN+ LGEWA+K LLQLVP+NDAAYVLLS     +  WS+
Sbjct: 659 WRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSD 708


>ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/110 (68%), Positives = 89/110 (80%)
 Frame = -2

Query: 509 SHLGLVELGCSFFDSISSVYKMVPSEENFGSLVDLFSRNGFLEEAKHVLEVMPFAPWPAV 330
           SHLGLVE G  FF S++  Y M PS +N+G LVDLFSRNGFLE+AKH++E MPF PWPA+
Sbjct: 575 SHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAI 634

Query: 329 WRSILNGCRIHGNRNLGEWASKHLLQLVPKNDAAYVLLSVKA*GKCDWSN 180
           WRS+LNGCRIHGN+ LGEWA+K LLQLVP+NDAAYVLLS     +  WS+
Sbjct: 635 WRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSD 684


>ref|XP_004173450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 453

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/98 (57%), Positives = 77/98 (78%)
 Frame = -2

Query: 506 HLGLVELGCSFFDSISSVYKMVPSEENFGSLVDLFSRNGFLEEAKHVLEVMPFAPWPAVW 327
           H+GLVE G S F ++ S Y M PS +N+G LVD+ SRNGFL +A++++E MPF+PWPA+ 
Sbjct: 321 HMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAIL 380

Query: 326 RSILNGCRIHGNRNLGEWASKHLLQLVPKNDAAYVLLS 213
           RS+L+GCRI+GNR LG+W ++ LL L P+N A +VLLS
Sbjct: 381 RSLLSGCRIYGNRELGQWTAEKLLSLAPQNLATHVLLS 418


>ref|XP_004171410.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 172

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/98 (57%), Positives = 77/98 (78%)
 Frame = -2

Query: 506 HLGLVELGCSFFDSISSVYKMVPSEENFGSLVDLFSRNGFLEEAKHVLEVMPFAPWPAVW 327
           H+GLVE G S F ++ S Y M PS +N+G LVD+ SRNGFL +A++++E MPF+PWPA+ 
Sbjct: 40  HMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAIL 99

Query: 326 RSILNGCRIHGNRNLGEWASKHLLQLVPKNDAAYVLLS 213
           RS+L+GCRI+GNR LG+W ++ LL L P+N A +VLLS
Sbjct: 100 RSLLSGCRIYGNRELGQWTAEKLLSLAPQNLATHVLLS 137


>ref|XP_004147136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 638

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/98 (57%), Positives = 77/98 (78%)
 Frame = -2

Query: 506 HLGLVELGCSFFDSISSVYKMVPSEENFGSLVDLFSRNGFLEEAKHVLEVMPFAPWPAVW 327
           H+GLVE G S F ++ S Y M PS +N+G LVD+ SRNGFL +A++++E MPF+PWPA+ 
Sbjct: 506 HMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAIL 565

Query: 326 RSILNGCRIHGNRNLGEWASKHLLQLVPKNDAAYVLLS 213
           RS+L+GCRI+GNR LG+W ++ LL L P+N A +VLLS
Sbjct: 566 RSLLSGCRIYGNRELGQWTAEKLLSLAPQNLATHVLLS 603