BLASTX nr result

ID: Coptis24_contig00031406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031406
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510838.1| conserved hypothetical protein [Ricinus comm...   181   1e-43
ref|XP_004140790.1| PREDICTED: uncharacterized protein LOC101219...   174   1e-41
ref|XP_002322447.1| predicted protein [Populus trichocarpa] gi|2...   172   5e-41
emb|CBI31835.3| unnamed protein product [Vitis vinifera]              171   1e-40
ref|XP_002274647.1| PREDICTED: uncharacterized protein LOC100252...   171   1e-40

>ref|XP_002510838.1| conserved hypothetical protein [Ricinus communis]
           gi|223549953|gb|EEF51440.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 308

 Score =  181 bits (458), Expect = 1e-43
 Identities = 100/158 (63%), Positives = 117/158 (74%), Gaps = 3/158 (1%)
 Frame = -3

Query: 465 ISPLHFPSQFRANTSNKITRTKRKKLSISVSLNDV---KEQDQQLNLSVLRFTLGIRGLD 295
           I+PL    +FRAN S      K K  SI V +++    K+Q Q LNLSVLRFT GI GLD
Sbjct: 6   INPLITHPKFRANNS-----VKSKNASIIVRIDNSQRKKDQQQDLNLSVLRFTFGIPGLD 60

Query: 294 ESNLPRWIGYTFGSLLFLNHFIGSYSPTTPAQLRSEALGLSLAAFSIAIPYLGKFLKGAP 115
           ES LPRWIGY FGSLL LNHF+GS S T+  Q+R+EALGLSLAAFSIA+PY G+FLKGA 
Sbjct: 61  ESYLPRWIGYGFGSLLVLNHFLGSNSVTSLPQMRTEALGLSLAAFSIALPYFGRFLKGAT 120

Query: 114 LVDQPILPEGNKQIFSMSESVSGMQKEDLAWGTYVLLK 1
            VDQ  LP+G++QIF MSE+VS   KEDLAW TYVLL+
Sbjct: 121 PVDQTALPQGSEQIFVMSENVSDTLKEDLAWATYVLLR 158


>ref|XP_004140790.1| PREDICTED: uncharacterized protein LOC101219803 [Cucumis sativus]
           gi|449530412|ref|XP_004172189.1| PREDICTED:
           uncharacterized LOC101219803 [Cucumis sativus]
          Length = 288

 Score =  174 bits (442), Expect = 1e-41
 Identities = 100/160 (62%), Positives = 116/160 (72%), Gaps = 5/160 (3%)
 Frame = -3

Query: 465 ISPLHFPSQFRANTSNKITRTKRKKL--SISVSLNDVKEQ-DQQLNLSVLRFTLGIRGLD 295
           IS +  PS     TS    R K K    +IS  L+D K   +QQLNLSVLRFTLGI GLD
Sbjct: 2   ISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLD 61

Query: 294 ESNLPRWIGYTFGSLLFLNHFIGSYSP--TTPAQLRSEALGLSLAAFSIAIPYLGKFLKG 121
           ES LPRWIGY FGSLL LNHF+GS S   TTPAQLR+EALG+SLAAFSIA+PYLGKFLKG
Sbjct: 62  ESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLGKFLKG 121

Query: 120 APLVDQPILPEGNKQIFSMSESVSGMQKEDLAWGTYVLLK 1
           A    + ILPEG +QIF +S+ +S   KED+AW TY+LL+
Sbjct: 122 ALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLR 161


>ref|XP_002322447.1| predicted protein [Populus trichocarpa] gi|222869443|gb|EEF06574.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  172 bits (436), Expect = 5e-41
 Identities = 92/149 (61%), Positives = 110/149 (73%), Gaps = 2/149 (1%)
 Frame = -3

Query: 441 QFRANTSNKITRTKRKKLSISVSLNDVKEQ--DQQLNLSVLRFTLGIRGLDESNLPRWIG 268
           QFRA  +       RK ++I  S ++ + Q   QQLNLSVLRFT GI GLDES LPRWIG
Sbjct: 1   QFRAKKT-------RKSIAIHASSDNPQSQRQQQQLNLSVLRFTFGIPGLDESYLPRWIG 53

Query: 267 YTFGSLLFLNHFIGSYSPTTPAQLRSEALGLSLAAFSIAIPYLGKFLKGAPLVDQPILPE 88
           Y FGSLL LNHF+GS   TT AQLR+E LGLSLAAFS A+PY G+FLKGA  VDQ  LP+
Sbjct: 54  YGFGSLLILNHFLGSNPDTTQAQLRTEVLGLSLAAFSAALPYFGRFLKGATPVDQGTLPQ 113

Query: 87  GNKQIFSMSESVSGMQKEDLAWGTYVLLK 1
             +QIF+MS+++S  QKEDLAW TY+LL+
Sbjct: 114 DAEQIFAMSQNISDAQKEDLAWATYILLR 142


>emb|CBI31835.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  171 bits (433), Expect = 1e-40
 Identities = 99/171 (57%), Positives = 121/171 (70%), Gaps = 5/171 (2%)
 Frame = -3

Query: 498 KREMNTLISNWISPLH---FPSQFRANTSNKIT-RTKRKKLSISVSLNDVKEQDQQLNLS 331
           +++MN +I   + PL    FP++ R++     T  T RK  SIS S      Q QQLNLS
Sbjct: 23  RKKMNGVIWKPLIPLKPPSFPAKARSSHLPVSTINTTRKFQSISAS-----NQQQQLNLS 77

Query: 330 VLRFTLGIRGLDESNLPRWIGYTFGSLLFLNHFIGSYSPT-TPAQLRSEALGLSLAAFSI 154
           VLRFTLGI G DES LPRWIGY FGS + LNHF+GS   T T AQLR+EALGL LAAFS+
Sbjct: 78  VLRFTLGIPGFDESYLPRWIGYGFGSFILLNHFVGSDLNTITAAQLRTEALGLCLAAFSV 137

Query: 153 AIPYLGKFLKGAPLVDQPILPEGNKQIFSMSESVSGMQKEDLAWGTYVLLK 1
            +PYLGKFLKGA  VDQ  LPEG +QIF M++++S + KEDLAW TY+LL+
Sbjct: 138 VLPYLGKFLKGAAPVDQTTLPEGIEQIFVMTQNISDILKEDLAWATYILLR 188


>ref|XP_002274647.1| PREDICTED: uncharacterized protein LOC100252183 [Vitis vinifera]
          Length = 311

 Score =  171 bits (433), Expect = 1e-40
 Identities = 99/171 (57%), Positives = 121/171 (70%), Gaps = 5/171 (2%)
 Frame = -3

Query: 498 KREMNTLISNWISPLH---FPSQFRANTSNKIT-RTKRKKLSISVSLNDVKEQDQQLNLS 331
           +++MN +I   + PL    FP++ R++     T  T RK  SIS S      Q QQLNLS
Sbjct: 23  RKKMNGVIWKPLIPLKPPSFPAKARSSHLPVSTINTTRKFQSISAS-----NQQQQLNLS 77

Query: 330 VLRFTLGIRGLDESNLPRWIGYTFGSLLFLNHFIGSYSPT-TPAQLRSEALGLSLAAFSI 154
           VLRFTLGI G DES LPRWIGY FGS + LNHF+GS   T T AQLR+EALGL LAAFS+
Sbjct: 78  VLRFTLGIPGFDESYLPRWIGYGFGSFILLNHFVGSDLNTITAAQLRTEALGLCLAAFSV 137

Query: 153 AIPYLGKFLKGAPLVDQPILPEGNKQIFSMSESVSGMQKEDLAWGTYVLLK 1
            +PYLGKFLKGA  VDQ  LPEG +QIF M++++S + KEDLAW TY+LL+
Sbjct: 138 VLPYLGKFLKGAAPVDQTTLPEGIEQIFVMTQNISDILKEDLAWATYILLR 188


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