BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031385
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]   184   9e-45
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
emb|CBI15196.3| unnamed protein product [Vitis vinifera]              160   8e-38
ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36

>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
          Length = 569

 Score =  184 bits (466), Expect = 9e-45
 Identities = 86/147 (58%), Positives = 119/147 (80%)
 Frame = -1

Query: 442 QAFKQIEKPSTIVWNQIIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKL 263
           + F++IE PST VWNQ+IRG+++SE P K +EL+N++   E AE + FTYSF++  CA+ 
Sbjct: 87  KVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAE-AEPNEFTYSFLIGGCARS 145

Query: 262 GFLREGEQVHGRILCKGVCSDVFVQTNLVNMYALSGGDDGVIKARRVFDEMNERSVVTWN 83
             LREGEQVHGR++  G C++VFV+T+LVN+YA++GG DGV KARRVFDE+ +R++V+WN
Sbjct: 146 XLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWN 205

Query: 82  AMLAGYLRRGFVDEARNFFDDMPERNV 2
           ++LAGY+R G VD AR  FD+MPERNV
Sbjct: 206 SLLAGYVRCGDVDGARRIFDEMPERNV 232



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = -1

Query: 436 FKQIEKPSTIVWNQIIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKLGF 257
           F ++ + + + W  +I G A+     +++ LF+++ R    + D       L+ACA+LG 
Sbjct: 224 FDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAG-VKLDQVALVAALSACAELGD 282

Query: 256 LREGEQVHG----RILCKGVCSDVFVQTNLVNMYALSGGDDGVIKARRVFDEMNERSVVT 89
           L+ G  +H     R+        V +  +L++MYA  G  D   KA +VF  M +RS ++
Sbjct: 283 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVID---KAYKVFIGMQQRSTIS 339

Query: 88  WNAMLAGYLRRGFVDEARNFFDDM 17
           W +M+ G+ ++G  +EA   F  M
Sbjct: 340 WTSMITGFAKQGHAEEALGVFQWM 363


>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score =  183 bits (465), Expect = 1e-44
 Identities = 86/147 (58%), Positives = 119/147 (80%)
 Frame = -1

Query: 442 QAFKQIEKPSTIVWNQIIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKL 263
           + F++IE PST VWNQ+IRG+++SE P K +EL+N++   E AE + FTYSF++  CA+ 
Sbjct: 71  KVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAE-AEPNEFTYSFLIGGCARS 129

Query: 262 GFLREGEQVHGRILCKGVCSDVFVQTNLVNMYALSGGDDGVIKARRVFDEMNERSVVTWN 83
             LREGEQVHGR++  G C++VFV+T+LVN+YA++GG DGV KARRVFDE+ +R++V+WN
Sbjct: 130 RLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWN 189

Query: 82  AMLAGYLRRGFVDEARNFFDDMPERNV 2
           ++LAGY+R G VD AR  FD+MPERNV
Sbjct: 190 SLLAGYVRCGDVDGARRIFDEMPERNV 216



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = -1

Query: 436 FKQIEKPSTIVWNQIIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKLGF 257
           F ++ + + + W  +I G A+     +++ LF+++ R    + D       L+ACA+LG 
Sbjct: 208 FDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAG-VKLDQVALVAALSACAELGD 266

Query: 256 LREGEQVHG----RILCKGVCSDVFVQTNLVNMYALSGGDDGVIKARRVFDEMNERSVVT 89
           L+ G  +H     R+        V +  +L++MYA  G  D   KA +VF  M +RS ++
Sbjct: 267 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVID---KAYKVFIGMQQRSTIS 323

Query: 88  WNAMLAGYLRRGFVDEARNFFDDM 17
           W +M+ G+ ++G  +EA   F  M
Sbjct: 324 WTSMITGFAKQGHAEEALGVFQWM 347


>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/131 (58%), Positives = 106/131 (80%)
 Frame = -1

Query: 394 IIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKLGFLREGEQVHGRILCK 215
           +IRG+++SE P K +EL+N++   E AE + FTYSF++  CA+   LREGEQVHGR++  
Sbjct: 1   MIRGHSQSETPHKLVELYNRMVEAE-AEPNEFTYSFLIGGCARSRLLREGEQVHGRVVAN 59

Query: 214 GVCSDVFVQTNLVNMYALSGGDDGVIKARRVFDEMNERSVVTWNAMLAGYLRRGFVDEAR 35
           G C++VFV+T+LVN+YA++GG DGV KARRVFDE+ +R++V+WN++LAGY+R G VD AR
Sbjct: 60  GYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGAR 119

Query: 34  NFFDDMPERNV 2
             FD+MPERNV
Sbjct: 120 RIFDEMPERNV 130



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = -1

Query: 436 FKQIEKPSTIVWNQIIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKLGF 257
           F ++ + + + W  +I G A+     +++ LF+++ R    + D       L+ACA+LG 
Sbjct: 122 FDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAG-VKLDQVALVAALSACAELGD 180

Query: 256 LREGEQVHG----RILCKGVCSDVFVQTNLVNMYALSGGDDGVIKARRVFDEMNERSVVT 89
           L+ G  +H     R+        V +  +L++MYA  G  D   KA +VF  M +RS ++
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVID---KAYKVFIGMQQRSTIS 237

Query: 88  WNAMLAGYLRRGFVDEARNFFDDM 17
           W +M+ G+ ++G  +EA   F  M
Sbjct: 238 WTSMITGFAKQGHAEEALGVFQWM 261


>ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 555

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/149 (53%), Positives = 108/149 (72%), Gaps = 2/149 (1%)
 Frame = -1

Query: 442 QAFKQIEKPSTIVWNQIIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKL 263
           + F+ I  PST VWNQII+G+ RS+   KSIELF ++  +   E +GFTYSF+L+AC + 
Sbjct: 80  KVFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRM-TLAGVEANGFTYSFLLSACVRS 138

Query: 262 GFLREGEQVHGRILCKGVCSDVFVQTNLVNMYAL--SGGDDGVIKARRVFDEMNERSVVT 89
              REGEQ+HGR+L  G  S+++V+TNL+N+YA    GGD  + +AR +FDEM + +VV 
Sbjct: 139 RLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVG 198

Query: 88  WNAMLAGYLRRGFVDEARNFFDDMPERNV 2
           WN++LAGY+RRG  D AR  FD+MPERNV
Sbjct: 199 WNSLLAGYVRRGDFDGARKVFDEMPERNV 227



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
 Frame = -1

Query: 442 QAFKQIEKPSTIVWNQIIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKL 263
           + F ++ + +   W  ++ G+A++     ++ LF+Q+ R    E D       L+ACA+L
Sbjct: 217 KVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAG-VELDQVALVAALSACAEL 275

Query: 262 GFLREGEQVHGRI--LCKGVCSDVFVQTN--LVNMYALSGGDDGVIKARRVFDEMNERSV 95
           G L  G+ +HG +    +     V V  N  L++MYA  G  D    A +VF+E+ +R+ 
Sbjct: 276 GDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMD---LAYKVFEEIPQRNT 332

Query: 94  VTWNAMLAGYLRRGFVDEARNFFDDM 17
           V+W++++ G+ ++G   EA   F  M
Sbjct: 333 VSWSSIITGFAKQGCGVEAIRIFQLM 358


>ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 555

 Score =  156 bits (395), Expect = 1e-36
 Identities = 79/150 (52%), Positives = 108/150 (72%), Gaps = 3/150 (2%)
 Frame = -1

Query: 442 QAFKQIEKPSTIVWNQIIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKL 263
           + F+ I  PST VWNQII+G+ RS+   KSIELF ++  +   E +GFTYSF+L+AC + 
Sbjct: 80  KVFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRM-TLAGVEANGFTYSFLLSACVRS 138

Query: 262 GFLREGEQVHGRILCKGVCSDVFVQTNLVNMYALSGGDDGVIKARR---VFDEMNERSVV 92
              REGEQ+HGR+L  G  S+++V+TNL+N+YA +GGD G    +R   +FDEM + +VV
Sbjct: 139 RLFREGEQIHGRVLVNGYWSNLYVRTNLINLYA-NGGDGGDFDLKRALYLFDEMPDSNVV 197

Query: 91  TWNAMLAGYLRRGFVDEARNFFDDMPERNV 2
            WN++LAGY+RRG  D AR  FD+MPERNV
Sbjct: 198 GWNSLLAGYVRRGDFDGARKVFDEMPERNV 227



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/146 (28%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
 Frame = -1

Query: 442 QAFKQIEKPSTIVWNQIIRGYARSEAPIKSIELFNQLGRVEEAEFDGFTYSFVLNACAKL 263
           + F ++ + +   W  ++ G+A++     ++ LF+Q+ R    E D       L+ACA+L
Sbjct: 217 KVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAG-VELDQVALVAALSACAEL 275

Query: 262 GFLREGEQVHGRI--LCKGVCSDVFVQTN--LVNMYALSGGDDGVIKARRVFDEMNERSV 95
           G L  G+ +HG +    +     V V  N  L++MYA  G  D    A ++F+E+ +R+ 
Sbjct: 276 GDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMD---LAYKLFEEIPQRNT 332

Query: 94  VTWNAMLAGYLRRGFVDEARNFFDDM 17
           V+W++++ G+ ++G   EA   F  M
Sbjct: 333 VSWSSIITGFAKQGCGVEAIRIFQLM 358