BLASTX nr result

ID: Coptis24_contig00031379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031379
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533739.1| Indole-3-acetic acid-amido synthetase GH3.6,...    78   6e-13
emb|CBI20465.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002283229.1| PREDICTED: indole-3-acetic acid-amido synthe...    77   1e-12
ref|XP_002316954.1| GH3 family protein [Populus trichocarpa] gi|...    74   1e-11
ref|XP_002319260.1| GH3 family protein [Populus trichocarpa] gi|...    73   3e-11

>ref|XP_002533739.1| Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus
           communis] gi|223526345|gb|EEF28642.1| Indole-3-acetic
           acid-amido synthetase GH3.6, putative [Ricinus communis]
          Length = 612

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/60 (66%), Positives = 46/60 (76%)
 Frame = -3

Query: 181 MPEAPKKTSVLPRNDEMMDYSLSEKNKKTLQFIEDVTSNPDDVQKRVLAEITTSNAHVEY 2
           MPEAPK + +        DY+LSEKN+KTLQFIEDVTSNPD+VQK+VL EI T NA VEY
Sbjct: 1   MPEAPKNSLI------SSDYNLSEKNRKTLQFIEDVTSNPDEVQKKVLEEILTRNARVEY 54


>emb|CBI20465.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/60 (68%), Positives = 45/60 (75%)
 Frame = -3

Query: 181 MPEAPKKTSVLPRNDEMMDYSLSEKNKKTLQFIEDVTSNPDDVQKRVLAEITTSNAHVEY 2
           MPEAPKK+     +D    Y L+EKNKK LQFIEDVT+N D VQKRVLAEI T NAHVEY
Sbjct: 1   MPEAPKKSFKATGHD----YCLAEKNKKALQFIEDVTTNADQVQKRVLAEILTRNAHVEY 56


>ref|XP_002283229.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6 isoform 1
           [Vitis vinifera] gi|147866579|emb|CAN83696.1|
           hypothetical protein VITISV_013365 [Vitis vinifera]
          Length = 613

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/60 (68%), Positives = 45/60 (75%)
 Frame = -3

Query: 181 MPEAPKKTSVLPRNDEMMDYSLSEKNKKTLQFIEDVTSNPDDVQKRVLAEITTSNAHVEY 2
           MPEAPKK+     +D    Y L+EKNKK LQFIEDVT+N D VQKRVLAEI T NAHVEY
Sbjct: 1   MPEAPKKSFKATGHD----YCLAEKNKKALQFIEDVTTNADQVQKRVLAEILTRNAHVEY 56


>ref|XP_002316954.1| GH3 family protein [Populus trichocarpa]
           gi|222860019|gb|EEE97566.1| GH3 family protein [Populus
           trichocarpa]
          Length = 611

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = -3

Query: 181 MPEAPKKTSVLPRNDEMMDYSLSEKNKKTLQFIEDVTSNPDDVQKRVLAEITTSNAHVEY 2
           MPEAPK T       +  DY+L+EKNKK+LQFIEDVTSN D+ QK+VL EI + NAHVEY
Sbjct: 1   MPEAPKNTL------KPSDYNLAEKNKKSLQFIEDVTSNADEAQKKVLEEILSRNAHVEY 54


>ref|XP_002319260.1| GH3 family protein [Populus trichocarpa]
           gi|222857636|gb|EEE95183.1| GH3 family protein [Populus
           trichocarpa]
          Length = 611

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = -3

Query: 181 MPEAPKKTSVLPRNDEMMDYSLSEKNKKTLQFIEDVTSNPDDVQKRVLAEITTSNAHVEY 2
           MPEAPK T       +  DY+L+EKNK +LQFIEDVTSN D+VQK+VL EI + NAHVEY
Sbjct: 1   MPEAPKNTL------KTSDYNLAEKNKISLQFIEDVTSNADEVQKKVLEEILSRNAHVEY 54


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