BLASTX nr result
ID: Coptis24_contig00031375
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031375 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi... 205 3e-51 emb|CBI23204.3| unnamed protein product [Vitis vinifera] 205 3e-51 ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi... 188 3e-46 ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi... 187 8e-46 ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi... 172 3e-41 >ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370-like [Vitis vinifera] Length = 732 Score = 205 bits (522), Expect = 3e-51 Identities = 94/130 (72%), Positives = 111/130 (85%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 LQ CAS+GAL QGKWIH+FV ++ +GPCI I TAL+DMYSKCGDL AQKCFD MP+QD+ Sbjct: 456 LQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDL 515 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRIFKS 362 VSWSSIIAGYGSHGKGE+ALRMY DFL +GI+PNHV +L+ILS+CSH G V +GL F S Sbjct: 516 VSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHS 575 Query: 363 MTEDFKIEPK 392 MT+DF IEP+ Sbjct: 576 MTKDFGIEPR 585 Score = 80.9 bits (198), Expect = 1e-13 Identities = 38/123 (30%), Positives = 71/123 (57%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 L CA LG+ G +H +++R I I +L+ MY+KCG L ++ FD M +D+ Sbjct: 355 LAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDI 414 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRIFKS 362 VSW++I++G+ +G AL ++ + + RP+ +T +++L +C+ G + +G I Sbjct: 415 VSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNF 474 Query: 363 MTE 371 +T+ Sbjct: 475 VTK 477 Score = 68.9 bits (167), Expect = 4e-10 Identities = 31/97 (31%), Positives = 58/97 (59%) Frame = +3 Query: 39 GKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDVVSWSSIIAGYGS 218 GK +H ++R G+ I T+LI MY KCG++ A + F+ M +DV+SW+++I+G Sbjct: 266 GKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQ 325 Query: 219 HGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTG 329 + + A+ ++ L S + P+ T ++L++C+ G Sbjct: 326 NDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELG 362 Score = 65.9 bits (159), Expect = 3e-09 Identities = 38/103 (36%), Positives = 55/103 (53%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 ++ C SL G H VI +G I T+LI+ YSK G A+K FD M +++V Sbjct: 55 VKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNV 114 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILS 311 V W+++I Y G+ + A MY GI+P+ VT L +LS Sbjct: 115 VPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS 157 Score = 64.7 bits (156), Expect = 7e-09 Identities = 28/91 (30%), Positives = 56/91 (61%) Frame = +3 Query: 48 IHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDVVSWSSIIAGYGSHGK 227 +H+ VI+ G G +++ +++++Y KCG + AQ F+ M +DV+SW+S+++GY G Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227 Query: 228 GESALRMYYDFLSSGIRPNHVTFLAILSSCS 320 L++ + GI P+ TF +++S+ + Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAA 258 >emb|CBI23204.3| unnamed protein product [Vitis vinifera] Length = 907 Score = 205 bits (522), Expect = 3e-51 Identities = 94/130 (72%), Positives = 111/130 (85%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 LQ CAS+GAL QGKWIH+FV ++ +GPCI I TAL+DMYSKCGDL AQKCFD MP+QD+ Sbjct: 456 LQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDL 515 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRIFKS 362 VSWSSIIAGYGSHGKGE+ALRMY DFL +GI+PNHV +L+ILS+CSH G V +GL F S Sbjct: 516 VSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHS 575 Query: 363 MTEDFKIEPK 392 MT+DF IEP+ Sbjct: 576 MTKDFGIEPR 585 Score = 80.9 bits (198), Expect = 1e-13 Identities = 38/123 (30%), Positives = 71/123 (57%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 L CA LG+ G +H +++R I I +L+ MY+KCG L ++ FD M +D+ Sbjct: 355 LAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDI 414 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRIFKS 362 VSW++I++G+ +G AL ++ + + RP+ +T +++L +C+ G + +G I Sbjct: 415 VSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNF 474 Query: 363 MTE 371 +T+ Sbjct: 475 VTK 477 Score = 68.9 bits (167), Expect = 4e-10 Identities = 31/97 (31%), Positives = 58/97 (59%) Frame = +3 Query: 39 GKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDVVSWSSIIAGYGS 218 GK +H ++R G+ I T+LI MY KCG++ A + F+ M +DV+SW+++I+G Sbjct: 266 GKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQ 325 Query: 219 HGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTG 329 + + A+ ++ L S + P+ T ++L++C+ G Sbjct: 326 NDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELG 362 Score = 65.9 bits (159), Expect = 3e-09 Identities = 38/103 (36%), Positives = 55/103 (53%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 ++ C SL G H VI +G I T+LI+ YSK G A+K FD M +++V Sbjct: 55 VKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNV 114 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILS 311 V W+++I Y G+ + A MY GI+P+ VT L +LS Sbjct: 115 VPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS 157 Score = 64.7 bits (156), Expect = 7e-09 Identities = 28/91 (30%), Positives = 56/91 (61%) Frame = +3 Query: 48 IHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDVVSWSSIIAGYGSHGK 227 +H+ VI+ G G +++ +++++Y KCG + AQ F+ M +DV+SW+S+++GY G Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227 Query: 228 GESALRMYYDFLSSGIRPNHVTFLAILSSCS 320 L++ + GI P+ TF +++S+ + Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAA 258 >ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370-like [Glycine max] Length = 755 Score = 188 bits (478), Expect = 3e-46 Identities = 85/129 (65%), Positives = 103/129 (79%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 LQ CAS G L GKWIHSFVIRNG+ PCI + T+L+DMY KCGDL AQ+CF++MP D+ Sbjct: 469 LQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDL 528 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRIFKS 362 VSWS+II GYG HGKGE+ALR Y FL SG++PNHV FL++LSSCSH G V +GL I++S Sbjct: 529 VSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYES 588 Query: 363 MTEDFKIEP 389 MT+DF I P Sbjct: 589 MTKDFGIAP 597 Score = 73.2 bits (178), Expect = 2e-11 Identities = 33/106 (31%), Positives = 61/106 (57%) Frame = +3 Query: 12 CASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDVVSW 191 CA LG+ G I +++R + ++ +L+ MY+KCG L ++ FD M +D+VSW Sbjct: 371 CAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSW 430 Query: 192 SSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTG 329 ++++ GY +G AL ++ + S P+ +T +++L C+ TG Sbjct: 431 NAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTG 476 Score = 69.7 bits (169), Expect = 2e-10 Identities = 34/117 (29%), Positives = 66/117 (56%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 L + AS G L+ G+ +H ++R G + T+LI +Y K G + A + F+ ++DV Sbjct: 267 LSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDV 326 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRI 353 V W+++I+G +G + AL ++ L G++P+ T +++++C+ G + G I Sbjct: 327 VLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSI 383 Score = 65.9 bits (159), Expect = 3e-09 Identities = 36/111 (32%), Positives = 60/111 (54%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 L+ C+ L G +H ++ +G+ I ++LI+ Y+K G A+K FD MPE++V Sbjct: 68 LKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNV 127 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFV 335 V W++II Y G+ A ++ + GI+P+ VT L++L S V Sbjct: 128 VPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHV 178 >ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370-like [Glycine max] Length = 764 Score = 187 bits (475), Expect = 8e-46 Identities = 85/129 (65%), Positives = 102/129 (79%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 LQ CAS G L GKWIHSFVIRNG+ PCI + T+L+DMY KCGDL AQ+CF++MP D+ Sbjct: 477 LQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDL 536 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRIFKS 362 VSWS+II GYG HGKGE+ALR Y FL SG++PNHV FL++LSSCSH G V +GL I++S Sbjct: 537 VSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYES 596 Query: 363 MTEDFKIEP 389 MT DF I P Sbjct: 597 MTRDFGIAP 605 Score = 73.9 bits (180), Expect = 1e-11 Identities = 33/106 (31%), Positives = 64/106 (60%) Frame = +3 Query: 12 CASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDVVSW 191 CA LG+ G +H ++ R+ + I+ +L+ M++KCG L ++ FD+M ++++VSW Sbjct: 379 CAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSW 438 Query: 192 SSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTG 329 +++I GY +G AL ++ + S P+ +T +++L C+ TG Sbjct: 439 NAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTG 484 Score = 68.9 bits (167), Expect = 4e-10 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 L+ C+SL G +H ++ +G+ I ++LI+ Y+K G A+K FD MPE++V Sbjct: 76 LKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNV 135 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFV 335 V W+SII Y G+ A ++ + GI+P+ VT L++L S V Sbjct: 136 VPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV 186 Score = 65.9 bits (159), Expect = 3e-09 Identities = 32/117 (27%), Positives = 65/117 (55%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 L + AS G L+ G+ +H ++R + T+LI MY K G++ A + F+ ++DV Sbjct: 275 LSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDV 334 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRI 353 V W+++I+G +G + AL ++ L G++ + T +++++C+ G + G + Sbjct: 335 VLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSV 391 Score = 54.7 bits (130), Expect = 8e-06 Identities = 30/114 (26%), Positives = 56/114 (49%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 L + + L + +H I G I++ +++ MY KC ++ ++K FD M ++D+ Sbjct: 174 LSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDL 233 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEG 344 VSW+S+++ Y G L + G P+ TF ++LS + G + G Sbjct: 234 VSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLG 287 >ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370-like [Cucumis sativus] Length = 743 Score = 172 bits (435), Expect = 3e-41 Identities = 76/129 (58%), Positives = 103/129 (79%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 LQ C S GAL QGKWIH+FV+R+ + PCI TAL+DMY KCG+L AQKCFD M ++D+ Sbjct: 457 LQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDL 516 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRIFKS 362 V+WS++I GYG +GKGE ALR Y +FL +G+ PNHV F+++LS+CSH G +S+GL I++S Sbjct: 517 VAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYES 576 Query: 363 MTEDFKIEP 389 MT+DF++ P Sbjct: 577 MTKDFRMSP 585 Score = 80.9 bits (198), Expect = 1e-13 Identities = 38/114 (33%), Positives = 65/114 (57%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 L CA LG G IH +V+R GI I +L+ MY+KC L ++ F++M E+D+ Sbjct: 356 LAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDL 415 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEG 344 VSW++I+AG+ +G + + + S +RP+ +T ++L +C G + +G Sbjct: 416 VSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQG 469 Score = 67.8 bits (164), Expect = 9e-10 Identities = 34/117 (29%), Positives = 63/117 (53%) Frame = +3 Query: 3 LQMCASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDV 182 L A G L+ GK +H ++++G+ + +AL+ +Y +C L A K F E+DV Sbjct: 255 LSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDV 314 Query: 183 VSWSSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRI 353 V W+++I+G + + AL ++Y + S ++P+ T + L++C+ G G I Sbjct: 315 VMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371 Score = 66.2 bits (160), Expect = 3e-09 Identities = 35/103 (33%), Positives = 54/103 (52%) Frame = +3 Query: 12 CASLGALQQGKWIHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDVVSW 191 C +L G +H V+ NG+ I ++LI Y+K G + +K FD M +++VV W Sbjct: 59 CTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPW 118 Query: 192 SSIIAGYGSHGKGESALRMYYDFLSSGIRPNHVTFLAILSSCS 320 ++II Y G + A M+ SGI+P VT L++L S Sbjct: 119 TTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGIS 161 Score = 62.4 bits (150), Expect = 4e-08 Identities = 29/109 (26%), Positives = 60/109 (55%) Frame = +3 Query: 48 IHSFVIRNGIGPCISIHTALIDMYSKCGDLCRAQKCFDEMPEQDVVSWSSIIAGYGSHGK 227 +H +I +G +++ ++++MY KCG + A++ F+ + +D+VSW+S+++ Y G Sbjct: 169 LHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGA 228 Query: 228 GESALRMYYDFLSSGIRPNHVTFLAILSSCSHTGFVSEGLRIFKSMTED 374 E L++ I+P+ TF + LS+ + G + G + M +D Sbjct: 229 TEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKD 277