BLASTX nr result

ID: Coptis24_contig00031365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031365
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267559.1| PREDICTED: uncharacterized protein LOC100232...   165   6e-39
ref|XP_002309065.1| predicted protein [Populus trichocarpa] gi|1...   165   6e-39
ref|XP_004166506.1| PREDICTED: uncharacterized protein C24B11.05...   156   3e-36
emb|CBI30538.3| unnamed protein product [Vitis vinifera]              153   3e-35
ref|NP_001241637.1| uncharacterized protein LOC100795391 [Glycin...   152   4e-35

>ref|XP_002267559.1| PREDICTED: uncharacterized protein LOC100232886 [Vitis vinifera]
           gi|7406669|emb|CAB85628.1| putative ripening-related
           protein [Vitis vinifera]
          Length = 301

 Score =  165 bits (418), Expect = 6e-39
 Identities = 89/154 (57%), Positives = 114/154 (74%), Gaps = 7/154 (4%)
 Frame = -2

Query: 662 LNPTNMNTISYDEDDSKDGRIKLNS-------HGIKPYDIIQHFAQSYAESELPETPIIC 504
           LNP++ +T+S DEDD    R+  N+          + +DII HF+Q  A + LP+TPI+C
Sbjct: 149 LNPSHKSTVSDDEDDIAFVRLTANTATATTTTSSTEIFDIIGHFSQPNAGTALPKTPIVC 208

Query: 503 KPFQATIEQALTIAKINPQRTVFFDDSVRNIQSAKRVGLQTVLVGTSQRVQGADSTLESI 324
           KP +A IE+AL IA INPQRT+FF+DS RNIQS KRVGL TVLVGTSQR++GAD  LESI
Sbjct: 209 KPSEAAIERALRIANINPQRTLFFEDSARNIQSGKRVGLHTVLVGTSQRIKGADFALESI 268

Query: 323 HNIREALPELFEAVENSEKITYSGRVAMETYVRA 222
           HN+REALPEL+E  + SE + Y+G+VA+ET V A
Sbjct: 269 HNMREALPELWEGDKKSE-VGYAGQVAVETPVTA 301


>ref|XP_002309065.1| predicted protein [Populus trichocarpa] gi|118486538|gb|ABK95108.1|
           unknown [Populus trichocarpa]
           gi|222855041|gb|EEE92588.1| predicted protein [Populus
           trichocarpa]
          Length = 305

 Score =  165 bits (418), Expect = 6e-39
 Identities = 91/158 (57%), Positives = 111/158 (70%), Gaps = 11/158 (6%)
 Frame = -2

Query: 662 LNPTNMNTISYDEDD-----------SKDGRIKLNSHGIKPYDIIQHFAQSYAESELPET 516
           LNPT+ NT+S DEDD           + +G     +   + +DI+ HFAQ    S LP+T
Sbjct: 149 LNPTHKNTVSDDEDDIEFVGSVVTPSTTNGSYTTTTSAPEIFDIVGHFAQPNPNSVLPKT 208

Query: 515 PIICKPFQATIEQALTIAKINPQRTVFFDDSVRNIQSAKRVGLQTVLVGTSQRVQGADST 336
           PI+CKP +A IE+AL IA INPQRT+FFDDSVRNIQ+ KRVGLQTVLVG SQRV+GAD  
Sbjct: 209 PIVCKPSEAAIERALKIANINPQRTLFFDDSVRNIQAGKRVGLQTVLVGYSQRVKGADFA 268

Query: 335 LESIHNIREALPELFEAVENSEKITYSGRVAMETYVRA 222
           LESIHNIR+ALPEL+E    SE + Y G+V +ET V A
Sbjct: 269 LESIHNIRQALPELWETDIKSE-VGYPGKVTVETPVTA 305


>ref|XP_004166506.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus]
          Length = 289

 Score =  156 bits (395), Expect = 3e-36
 Identities = 85/147 (57%), Positives = 108/147 (73%)
 Frame = -2

Query: 662 LNPTNMNTISYDEDDSKDGRIKLNSHGIKPYDIIQHFAQSYAESELPETPIICKPFQATI 483
           LNPTN N +S D+D+     I  +S   K +DII HF      +ELP+TPIICKP +A I
Sbjct: 149 LNPTNKNFVSVDKDEMNP--IPSDS---KIFDIIGHFLHPNPGTELPKTPIICKPSEAAI 203

Query: 482 EQALTIAKINPQRTVFFDDSVRNIQSAKRVGLQTVLVGTSQRVQGADSTLESIHNIREAL 303
           E+AL IA +NPQRT+FF+DSVRNIQ+ KRVGL TVL+GTSQRV+GAD  LESIHN+RE +
Sbjct: 204 ERALKIAGLNPQRTLFFEDSVRNIQAGKRVGLDTVLIGTSQRVKGADYALESIHNLREGI 263

Query: 302 PELFEAVENSEKITYSGRVAMETYVRA 222
           PEL+  VE   ++ Y+G+V +ET V A
Sbjct: 264 PELWN-VEIKSEMGYAGKVGVETSVTA 289


>emb|CBI30538.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  153 bits (386), Expect = 3e-35
 Identities = 78/117 (66%), Positives = 96/117 (82%)
 Frame = -2

Query: 572 YDIIQHFAQSYAESELPETPIICKPFQATIEQALTIAKINPQRTVFFDDSVRNIQSAKRV 393
           +DII HF+Q  A + LP+TPI+CKP +A IE+AL IA INPQRT+FF+DS RNIQS KRV
Sbjct: 290 FDIIGHFSQPNAGTALPKTPIVCKPSEAAIERALRIANINPQRTLFFEDSARNIQSGKRV 349

Query: 392 GLQTVLVGTSQRVQGADSTLESIHNIREALPELFEAVENSEKITYSGRVAMETYVRA 222
           GL TVLVGTSQR++GAD  LESIHN+REALPEL+E  + SE + Y+G+VA+ET V A
Sbjct: 350 GLHTVLVGTSQRIKGADFALESIHNMREALPELWEGDKKSE-VGYAGQVAVETPVTA 405


>ref|NP_001241637.1| uncharacterized protein LOC100795391 [Glycine max]
           gi|255640503|gb|ACU20537.1| unknown [Glycine max]
          Length = 297

 Score =  152 bits (385), Expect = 4e-35
 Identities = 83/155 (53%), Positives = 108/155 (69%), Gaps = 8/155 (5%)
 Frame = -2

Query: 662 LNPTNMNTISYDEDD--------SKDGRIKLNSHGIKPYDIIQHFAQSYAESELPETPII 507
           LNP + +T+S DEDD        + +   K ++   + +DII HFAQ    + LP+TPII
Sbjct: 144 LNPIHKSTVSDDEDDIEFVGGSGTTNPTTKKDASSFQIFDIIGHFAQPNPHTVLPKTPII 203

Query: 506 CKPFQATIEQALTIAKINPQRTVFFDDSVRNIQSAKRVGLQTVLVGTSQRVQGADSTLES 327
           CKP +  IE AL IA +NPQRT+FF+DSVRN Q+ KRVGL TVLVG SQR++GAD  LES
Sbjct: 204 CKPSENAIELALKIANLNPQRTLFFEDSVRNTQAGKRVGLHTVLVGKSQRIKGADYALES 263

Query: 326 IHNIREALPELFEAVENSEKITYSGRVAMETYVRA 222
           IHN+REA+PEL+E    SE + Y G++A+ET V A
Sbjct: 264 IHNLREAVPELWEDDIKSE-VAYPGKLAVETSVTA 297


Top