BLASTX nr result

ID: Coptis24_contig00031364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031364
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546223.1| PREDICTED: uncharacterized protein LOC100790...   107   1e-21
emb|CBI24666.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252...   105   4e-21
ref|XP_002525247.1| conserved hypothetical protein [Ricinus comm...   102   4e-20
ref|XP_002308732.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18

>ref|XP_003546223.1| PREDICTED: uncharacterized protein LOC100790308 [Glycine max]
          Length = 178

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/100 (55%), Positives = 73/100 (73%)
 Frame = +3

Query: 3   KKHVELRQLKKERTLSSILEAQLPYLDEWSTLEDDYSTSLGGAIKALQDISL*LPVTGNV 182
           KK +EL  L++ +TLS+ILEAQ+PYLDEWST+ ++YS S+  AI+AL + S  LPV GNV
Sbjct: 28  KKRIELELLRRSKTLSTILEAQIPYLDEWSTMMEEYSVSITEAIQALVNASERLPVGGNV 87

Query: 183 RADNEEGGRALNSASNVMELMSSFVKSFLPKGEDMDNMIS 302
           R D  + G ALNSAS +ME M S ++ F+PK E+ D  IS
Sbjct: 88  RVDVRQLGEALNSASKMMETMISNIQRFMPKAEETDVSIS 127


>emb|CBI24666.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/99 (53%), Positives = 72/99 (72%)
 Frame = +3

Query: 6   KHVELRQLKKERTLSSILEAQLPYLDEWSTLEDDYSTSLGGAIKALQDISL*LPVTGNVR 185
           K +EL  L++   L +ILEAQ+P+LDEWS LE DYS SL  AI+AL + SL LP+ GN+R
Sbjct: 29  KRIELGLLQRTNILVTILEAQMPFLDEWSILEGDYSVSLSEAIQALVNASLQLPINGNIR 88

Query: 186 ADNEEGGRALNSASNVMELMSSFVKSFLPKGEDMDNMIS 302
           AD  E   AL SA+ +ME++ S V+ F+PK E+MDN++S
Sbjct: 89  ADIREVNEALYSATKMMEIIISNVQMFMPKAEEMDNLVS 127


>ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252686 [Vitis vinifera]
          Length = 614

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/99 (53%), Positives = 72/99 (72%)
 Frame = +3

Query: 6   KHVELRQLKKERTLSSILEAQLPYLDEWSTLEDDYSTSLGGAIKALQDISL*LPVTGNVR 185
           K +EL  L++   L +ILEAQ+P+LDEWS LE DYS SL  AI+AL + SL LP+ GN+R
Sbjct: 462 KRIELGLLQRTNILVTILEAQMPFLDEWSILEGDYSVSLSEAIQALVNASLQLPINGNIR 521

Query: 186 ADNEEGGRALNSASNVMELMSSFVKSFLPKGEDMDNMIS 302
           AD  E   AL SA+ +ME++ S V+ F+PK E+MDN++S
Sbjct: 522 ADIREVNEALYSATKMMEIIISNVQMFMPKAEEMDNLVS 560


>ref|XP_002525247.1| conserved hypothetical protein [Ricinus communis]
           gi|223535544|gb|EEF37213.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 504

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/100 (50%), Positives = 73/100 (73%)
 Frame = +3

Query: 3   KKHVELRQLKKERTLSSILEAQLPYLDEWSTLEDDYSTSLGGAIKALQDISL*LPVTGNV 182
           +K +E   L++ + LS+ILEAQ+PYL+EWSTLE+DYS SL  AI+A  ++SL LP++GN 
Sbjct: 337 QKRIEHSLLQRIKALSTILEAQMPYLEEWSTLEEDYSVSLTEAIQAFMNVSLRLPISGNF 396

Query: 183 RADNEEGGRALNSASNVMELMSSFVKSFLPKGEDMDNMIS 302
           R+D  E G ALNSA+ +ME +   ++  +PK E+M+  IS
Sbjct: 397 RSDVRELGEALNSATKLMESIVIHIQGLMPKAEEMEYFIS 436


>ref|XP_002308732.1| predicted protein [Populus trichocarpa] gi|222854708|gb|EEE92255.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/97 (49%), Positives = 71/97 (73%)
 Frame = +3

Query: 12  VELRQLKKERTLSSILEAQLPYLDEWSTLEDDYSTSLGGAIKALQDISL*LPVTGNVRAD 191
           VEL  L++ + L +I+EAQ+PYLDEWS  E DYS SL  AI+AL + SL +P++GN RAD
Sbjct: 183 VELGLLQRIKLLWTIVEAQMPYLDEWSAFETDYSVSLSEAIQALLNASLQVPISGNARAD 242

Query: 192 NEEGGRALNSASNVMELMSSFVKSFLPKGEDMDNMIS 302
             E G ALNSA+ +M+ ++  ++S +PK E+ +++IS
Sbjct: 243 IREVGEALNSAAKLMDTIAFHIESLMPKAEETEHLIS 279


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