BLASTX nr result

ID: Coptis24_contig00031357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031357
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599060.1| Cc-nbs resistance protein [Medicago truncatu...    80   4e-13
ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|2...    79   1e-12
ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trich...    79   1e-12
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    78   2e-12
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12

>ref|XP_003599060.1| Cc-nbs resistance protein [Medicago truncatula]
            gi|355488108|gb|AES69311.1| Cc-nbs resistance protein
            [Medicago truncatula]
          Length = 1165

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 69/200 (34%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
 Frame = +1

Query: 16   MPVGIGQLTCLETLSMFAVCSSTECAGIQELERLNQIKGELSIKGLGHVCNQKDAERSN- 192
            MP  IG L  L+TLS F V      + IQEL +LN+++G+L I GL HV N +DA  +N 
Sbjct: 649  MPKQIGSLIHLQTLSHFVV-EEENGSNIQELGKLNRLRGKLCISGLEHVINPEDAAGANL 707

Query: 193  -DKKRIEKLNVWWSGGDDQGSLNSLHENISREVVEGLHPHT----IYRIQRYPGVFLPSW 357
             DKK +E+LN+ +  GD+    N+  E+    V E L P+     +Y I +Y G   P W
Sbjct: 708  KDKKHVEELNMKY--GDNYKLNNNRSES---NVFEALQPNNNLNRLY-ISQYKGKSFPKW 761

Query: 358  LGTSRTLPKLISLSLYRMPNVEGSRMVVSTCASTLYLPLSIEELAVERCNEVDCLPEAPL 537
            +     LP L+SL L              +C S L+LP                    PL
Sbjct: 762  IRGCH-LPNLVSLKL-------------QSCGSCLHLP--------------------PL 787

Query: 538  QNLTCLRTLVIKTCKILKIL 597
              L CL+ L I  C  +KI+
Sbjct: 788  GQLPCLKELAICDCHGIKII 807


>ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|222844717|gb|EEE82264.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 57/142 (40%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
 Frame = +1

Query: 16  MPVGIGQLTCLETLSMFAVCSSTECAG-IQELERLNQIKGELSIKGLGHVCNQKDAERSN 192
           MP G+GQLTCL  L MF V   TE    I EL+RLN I GELSIK LG+V    DA+ +N
Sbjct: 1   MPSGMGQLTCLRKLGMFIV--GTEAGHHIGELQRLNYIGGELSIKDLGNVQGLTDAQNAN 58

Query: 193 --DKKRIEKLNVWWSGGDDQGSLNSLHENISREVVEGLHPHTIYR---IQRYPGVFLPSW 357
              K  ++ L++ W     + + + + E IS +V+  L PH+  +   I  Y G   P W
Sbjct: 59  LMRKTNLQSLSLSWR----EDNSSKISEAISEDVLCALEPHSNMKKLEISGYRGSKFPDW 114

Query: 358 LGTSRTLPKLISLSLYRMPNVE 423
           +   R LP L+ +SL    N E
Sbjct: 115 MMELR-LPNLVEISLESCMNCE 135


>ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222832589|gb|EEE71066.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 851

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
 Frame = +1

Query: 1    GVLTGMPVGIGQLTCLETLSMFAVCSSTECAGIQELERLNQIKGELSIKGLGHVCNQKDA 180
            G L  MP G+GQL  L  L++F V        I ELERLN + GELSI  L +V N KDA
Sbjct: 590  GSLRDMPAGMGQLIGLRKLTLFIV-GGENGRSISELERLNNLAGELSIADLVNVKNLKDA 648

Query: 181  ERSNDKKRIEKLNV---WWSGGDDQGSLNSLHENISREVVEGLHPHT---IYRIQRYPGV 342
            + +N K +   L++   W   G  Q   + + EN + EV+EGL PH+     +I  Y G 
Sbjct: 649  KSANLKLKTALLSLTLSWHGNGAPQQRKSVIQEN-NEEVLEGLQPHSNLKKLKIWGYGGS 707

Query: 343  FLPSW-LGTSRTLPKLISLSL 402
              P+W +  + TLP L+ + L
Sbjct: 708  RFPNWMMNLNMTLPNLVEMEL 728


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1075

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
 Frame = +1

Query: 16   MPVGIGQLTCLETLSMFAVCSSTECAGIQELERLNQIKGELSIKGLGHVCNQKDAERSN- 192
            MP G+GQL CL  L+MF V        I ELE LN + GELSI  L +V N +DA+ +N 
Sbjct: 652  MPCGMGQLICLRKLTMFIV-GGENGRRISELESLNNLAGELSIAYLVNVKNLEDAKSANL 710

Query: 193  -DKKRIEKLNVWWSGGDDQGSLNSLHENISREVVEGLHPHTIYR---IQRYPGVFLPSW- 357
              K  +  L + W+G        S+ +  S EV+EGL PH+  +   I  Y G   P+W 
Sbjct: 711  ELKTALLSLTLSWNG----NRTKSVIQENSEEVLEGLQPHSNLKKLMIWGYGGSRFPNWM 766

Query: 358  LGTSRTLPKLISLSLYRMPNVE 423
            +  + TLP L+ + L   PN E
Sbjct: 767  MNLNMTLPNLVEMELSACPNCE 788


>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 57/142 (40%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
 Frame = +1

Query: 16  MPVGIGQLTCLETLSMFAVCSSTECAG-IQELERLNQIKGELSIKGLGHVCNQKDAERSN 192
           MP G+GQLTCL  L MF V   TE    I EL+RLN I GELSIK LG+V    DA+ +N
Sbjct: 26  MPSGMGQLTCLRKLGMFIV--GTEAGHHIGELQRLNYIGGELSIKDLGNVQGLTDAQNAN 83

Query: 193 --DKKRIEKLNVWWSGGDDQGSLNSLHENISREVVEGLHPHTIYR---IQRYPGVFLPSW 357
              K  ++ L++ W   D     + + E  S +V+  L PH+  +   I  Y G   P W
Sbjct: 84  LMRKTNLQSLSLSWREDDS----SKISEANSEDVLCALEPHSNMKKLEISGYRGSKFPDW 139

Query: 358 LGTSRTLPKLISLSLYRMPNVE 423
           +   R LP L+ +SL    N E
Sbjct: 140 MMELR-LPNLVEISLESCMNCE 160


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