BLASTX nr result

ID: Coptis24_contig00031355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031355
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631787.1| PREDICTED: uncharacterized protein LOC100853...   150   7e-41
ref|XP_003633498.1| PREDICTED: uncharacterized protein LOC100855...   145   2e-39
ref|XP_003632566.1| PREDICTED: uncharacterized protein LOC100853...   146   4e-39
ref|XP_003632395.1| PREDICTED: uncharacterized protein LOC100853...   140   4e-38
gb|ABF96552.1| transposon protein, putative, CACTA, En/Spm sub-c...   132   4e-36

>ref|XP_003631787.1| PREDICTED: uncharacterized protein LOC100853519 [Vitis vinifera]
          Length = 414

 Score =  150 bits (378), Expect(2) = 7e-41
 Identities = 70/114 (61%), Positives = 83/114 (72%)
 Frame = -3

Query: 423 CIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSRI 244
           CIGAIDGTHI   VP+ + Q  +RGRK + TQNVMC C+FDM FTFV AGWEG+AND+R+
Sbjct: 176 CIGAIDGTHISAWVPADR-QTSFRGRKTVITQNVMCACNFDMMFTFVYAGWEGTANDARV 234

Query: 243 LQETIEDPQLNFPRPLLGKYYVVDSGYANAPGFLAPYRGQRYHLNEYSGHGRSP 82
             + +  P++NFP P  GKYYVVDSGY    GFL PYRG+RYHL EY G    P
Sbjct: 235 FLDALTRPEVNFPWPSEGKYYVVDSGYPCISGFLPPYRGERYHLQEYWGRHNQP 288



 Score = 42.4 bits (98), Expect(2) = 7e-41
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -1

Query: 74  QEQFNFAHASLRNIIERCFGVLK 6
           +E FN+ H+SLRNIIERCFGVLK
Sbjct: 292 KELFNYRHSSLRNIIERCFGVLK 314


>ref|XP_003633498.1| PREDICTED: uncharacterized protein LOC100855100 [Vitis vinifera]
          Length = 409

 Score =  145 bits (365), Expect(2) = 2e-39
 Identities = 67/114 (58%), Positives = 81/114 (71%)
 Frame = -3

Query: 423 CIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSRI 244
           CI AI+GTHI   VP+ + Q  +RGRK + TQNVMC C+FDM FTFV AGWEG+ ND+R+
Sbjct: 176 CISAINGTHISAWVPADR-QTSFRGRKTVITQNVMCACNFDMMFTFVYAGWEGTTNDARV 234

Query: 243 LQETIEDPQLNFPRPLLGKYYVVDSGYANAPGFLAPYRGQRYHLNEYSGHGRSP 82
             + +  P++NFP P  GKYYVVDSGY    GFL PYRG+RYHL EY G    P
Sbjct: 235 FLDALTRPEVNFPWPSEGKYYVVDSGYPCISGFLPPYRGERYHLQEYRGRRNQP 288



 Score = 42.4 bits (98), Expect(2) = 2e-39
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -1

Query: 74  QEQFNFAHASLRNIIERCFGVLK 6
           +E FN+ H+SLRNIIERCFGVLK
Sbjct: 292 KELFNYRHSSLRNIIERCFGVLK 314


>ref|XP_003632566.1| PREDICTED: uncharacterized protein LOC100853389 [Vitis vinifera]
          Length = 311

 Score =  146 bits (369), Expect(2) = 4e-39
 Identities = 69/114 (60%), Positives = 81/114 (71%)
 Frame = -3

Query: 423 CIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSRI 244
           CIGAIDGTHI   VP+ + Q  +RGRK + TQNVMC C+FDM FTFV AGWEG AND+R+
Sbjct: 127 CIGAIDGTHISAWVPADR-QTSFRGRKTVITQNVMCACNFDMMFTFVYAGWEGIANDARV 185

Query: 243 LQETIEDPQLNFPRPLLGKYYVVDSGYANAPGFLAPYRGQRYHLNEYSGHGRSP 82
             + +  P++NFP P  GKYYVVDSGY     FL PYRG+RYHL EY G    P
Sbjct: 186 FLDALTRPEVNFPWPSEGKYYVVDSGYPCISRFLPPYRGERYHLQEYRGRRNQP 239



 Score = 40.0 bits (92), Expect(2) = 4e-39
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = -1

Query: 74  QEQFNFAHASLRNIIERCFGVLK 6
           +E FN+ H+ LRNIIERCFGVLK
Sbjct: 243 KELFNYRHSFLRNIIERCFGVLK 265


>ref|XP_003632395.1| PREDICTED: uncharacterized protein LOC100853265 [Vitis vinifera]
          Length = 315

 Score =  140 bits (354), Expect(2) = 4e-38
 Identities = 67/114 (58%), Positives = 79/114 (69%)
 Frame = -3

Query: 423 CIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSRI 244
           CIGAIDGTHI   VP+ + Q  ++GRK + TQNVMC CDFDM F FV AGWE +AND R+
Sbjct: 176 CIGAIDGTHISAWVPADR-QTSFKGRKTVITQNVMCACDFDMMFIFVYAGWERTANDERV 234

Query: 243 LQETIEDPQLNFPRPLLGKYYVVDSGYANAPGFLAPYRGQRYHLNEYSGHGRSP 82
             + +   ++NFP P  GKYYVVDSGY    GFL PYRG+RYHL EY G    P
Sbjct: 235 FLDALTRLEVNFPWPSEGKYYVVDSGYPCISGFLPPYRGERYHLQEYRGRRIQP 288



 Score = 42.4 bits (98), Expect(2) = 4e-38
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -1

Query: 74  QEQFNFAHASLRNIIERCFGVLK 6
           +E FN+ H+SLRNIIERCFGVLK
Sbjct: 292 KELFNYRHSSLRNIIERCFGVLK 314


>gb|ABF96552.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 798

 Score =  132 bits (333), Expect(2) = 4e-36
 Identities = 63/107 (58%), Positives = 75/107 (70%)
 Frame = -3

Query: 423 CIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSRI 244
           CIGAIDGTH+P  VPS K+ + +   KG+ TQNVM VCDFDM FTFVLAGW GS +D R+
Sbjct: 574 CIGAIDGTHVPCVVPSNKL-VQHLCCKGMTTQNVMVVCDFDMRFTFVLAGWPGSVHDMRV 632

Query: 243 LQETIEDPQLNFPRPLLGKYYVVDSGYANAPGFLAPYRGQRYHLNEY 103
             +        FP    GKYY+VDSGY N PG+LAPY+G +YHL EY
Sbjct: 633 FDDAHTTYTHVFPHSPTGKYYLVDSGYPNRPGYLAPYKGTKYHLQEY 679



 Score = 43.9 bits (102), Expect(2) = 4e-36
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = -1

Query: 98  DMEDHQKSQEQFNFAHASLRNIIERCFGVLK 6
           D  + Q  +E FN+AH+SLRN+IER FGVLK
Sbjct: 681 DAPEPQGKEENFNYAHSSLRNVIERSFGVLK 711


Top