BLASTX nr result

ID: Coptis24_contig00031349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031349
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/112 (40%), Positives = 67/112 (59%)
 Frame = +3

Query: 3   LPESLFIRGNLLCLKSLVLDRCDGPMEVEVSSIYLTSFQYIGMTKNLRFVGAVSIEKVHL 182
           LP+ + I G LLCLK+L++   D  + VE+ SI L  F++ G  + L FV    ++K  +
Sbjct: 198 LPKIVCIHGQLLCLKTLIIH--DSLISVELKSINLEIFEFFGHPRKLTFVDVPHLKKALV 255

Query: 183 WFLSPFRRGTYYMFGGLAKELPDLQVLSLVLYTRQVIPIPANMTKFSHLKEL 338
             L  +RR T  +   LAK+LP LQ LSL++   +V+P+PA   KF  LK+L
Sbjct: 256 RSLFIYRR-TSPICNALAKDLPQLQFLSLIV-KDEVLPLPATSPKFISLKQL 305


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