BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031347
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27471.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   186   2e-45
ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi...   167   8e-40
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38

>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/161 (55%), Positives = 116/161 (72%)
 Frame = -3

Query: 487 GCMVNILGRAGCLTEAEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADP 308
           GCMV++LGRAG L EAE+LI+ MP+ PNA I GALL+AC IH N +LGK++GK LI+ DP
Sbjct: 343 GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDP 402

Query: 307 NHAGRYIQLATTFSATGEWDQAVKVRKMMKDRGVTKFPGCSSIELNGVVHEFYVRDWSHP 128
            H GRYI LA+  +A GEW+QA +VR+ MK++GV+K PGCS I +NG  HEF   D SHP
Sbjct: 403 GHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHP 462

Query: 127 QMKEINLMWDRIMVRLRQVGYIPMTGNXXXXXXXXXXETAI 5
           Q+KEI+ M ++I+ RLR+ GY P  G+          ETAI
Sbjct: 463 QIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAI 503


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/161 (55%), Positives = 116/161 (72%)
 Frame = -3

Query: 487 GCMVNILGRAGCLTEAEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADP 308
           GCMV++LGRAG L EAE+LI+ MP+ PNA I GALL+AC IH N +LGK++GK LI+ DP
Sbjct: 391 GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDP 450

Query: 307 NHAGRYIQLATTFSATGEWDQAVKVRKMMKDRGVTKFPGCSSIELNGVVHEFYVRDWSHP 128
            H GRYI LA+  +A GEW+QA +VR+ MK++GV+K PGCS I +NG  HEF   D SHP
Sbjct: 451 GHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHP 510

Query: 127 QMKEINLMWDRIMVRLRQVGYIPMTGNXXXXXXXXXXETAI 5
           Q+KEI+ M ++I+ RLR+ GY P  G+          ETAI
Sbjct: 511 QIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAI 551


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/161 (55%), Positives = 116/161 (72%)
 Frame = -3

Query: 487 GCMVNILGRAGCLTEAEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADP 308
           GCMV++LGRAG L EAE+LI+ MP+ PNA I GALL+AC IH N +LGK++GK LI+ DP
Sbjct: 391 GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDP 450

Query: 307 NHAGRYIQLATTFSATGEWDQAVKVRKMMKDRGVTKFPGCSSIELNGVVHEFYVRDWSHP 128
            H GRYI LA+  +A GEW+QA +VR+ MK++GV+K PGCS I +NG  HEF   D SHP
Sbjct: 451 GHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHP 510

Query: 127 QMKEINLMWDRIMVRLRQVGYIPMTGNXXXXXXXXXXETAI 5
           Q+KEI+ M ++I+ RLR+ GY P  G+          ETAI
Sbjct: 511 QIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAI 551


>ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 516

 Score =  167 bits (423), Expect = 8e-40
 Identities = 74/125 (59%), Positives = 99/125 (79%)
 Frame = -3

Query: 487 GCMVNILGRAGCLTEAEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADP 308
           GCMV+++GRAG L EA + I++MP+ PNA I GALL+AC +H++F+LGK +GK LIE DP
Sbjct: 383 GCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDP 442

Query: 307 NHAGRYIQLATTFSATGEWDQAVKVRKMMKDRGVTKFPGCSSIELNGVVHEFYVRDWSHP 128
           +H+GRYI LA+ ++A GEW+Q V+VR  +K RG+   PGCSSI LNGVVHEF+  D SHP
Sbjct: 443 DHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITLNGVVHEFFAGDGSHP 502

Query: 127 QMKEI 113
            ++EI
Sbjct: 503 HIQEI 507


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  162 bits (409), Expect = 3e-38
 Identities = 79/161 (49%), Positives = 105/161 (65%)
 Frame = -3

Query: 487 GCMVNILGRAGCLTEAEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADP 308
           GCMV++LGR+G  +EAE LI +MPM PNA + GALL AC IH NFDL +R+GK L+E +P
Sbjct: 435 GCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEP 494

Query: 307 NHAGRYIQLATTFSATGEWDQAVKVRKMMKDRGVTKFPGCSSIELNGVVHEFYVRDWSHP 128
            ++GRY+ L+  ++  G +D   K+RK+MKDRG+   PG S ++LNG VHEF + D SHP
Sbjct: 495 QNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHP 554

Query: 127 QMKEINLMWDRIMVRLRQVGYIPMTGNXXXXXXXXXXETAI 5
           QMKEI      I  RL+  G+ P T            ETA+
Sbjct: 555 QMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAV 595