BLASTX nr result
ID: Coptis24_contig00031330
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031330 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome a... 74 9e-12 emb|CBI39809.3| unnamed protein product [Vitis vinifera] 74 9e-12 ref|XP_002300584.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 ref|XP_004171223.1| PREDICTED: proteasome activator complex subu... 71 1e-10 ref|XP_004148265.1| PREDICTED: LOW QUALITY PROTEIN: proteasome a... 71 1e-10 >ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome activator complex subunit 4-like [Vitis vinifera] Length = 1813 Score = 74.3 bits (181), Expect = 9e-12 Identities = 37/58 (63%), Positives = 41/58 (70%) Frame = -2 Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3 MH+YNAWLP PV E TK EKE+F VV +VK +W P E ESVY TLKWISVID Sbjct: 1 MHLYNAWLPPPVAEATKGEKEAFGRVVAAVKEAWRP-----EDPESVYSTLKWISVID 53 >emb|CBI39809.3| unnamed protein product [Vitis vinifera] Length = 1808 Score = 74.3 bits (181), Expect = 9e-12 Identities = 37/58 (63%), Positives = 41/58 (70%) Frame = -2 Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3 MH+YNAWLP PV E TK EKE+F VV +VK +W P E ESVY TLKWISVID Sbjct: 1 MHLYNAWLPPPVAEATKGEKEAFGRVVAAVKEAWRP-----EDPESVYSTLKWISVID 53 >ref|XP_002300584.1| predicted protein [Populus trichocarpa] gi|222847842|gb|EEE85389.1| predicted protein [Populus trichocarpa] Length = 872 Score = 73.2 bits (178), Expect = 2e-11 Identities = 34/58 (58%), Positives = 43/58 (74%) Frame = -2 Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3 MH+YNAWLP PV EETK+EK+SF V+ SVK+S+ P D SVY TLKW+SV++ Sbjct: 1 MHLYNAWLPPPVAEETKKEKDSFRRVLNSVKDSYKPDDPD-----SVYSTLKWVSVLE 53 >ref|XP_004171223.1| PREDICTED: proteasome activator complex subunit 4-like [Cucumis sativus] Length = 909 Score = 70.9 bits (172), Expect = 1e-10 Identities = 36/58 (62%), Positives = 44/58 (75%) Frame = -2 Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3 MH+YNAWLP PV ET +EKESF VV S+K+S+ P DD+ +SVY TLKW+SVID Sbjct: 1 MHLYNAWLPPPVALETTKEKESFALVVNSLKDSYRP--DDL---DSVYSTLKWVSVID 53 >ref|XP_004148265.1| PREDICTED: LOW QUALITY PROTEIN: proteasome activator complex subunit 4-like [Cucumis sativus] Length = 1809 Score = 70.9 bits (172), Expect = 1e-10 Identities = 36/58 (62%), Positives = 44/58 (75%) Frame = -2 Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3 MH+YNAWLP PV ET +EKESF VV S+K+S+ P DD+ +SVY TLKW+SVID Sbjct: 1 MHLYNAWLPPPVALETTKEKESFALVVNSLKDSYRP--DDL---DSVYSTLKWVSVID 53