BLASTX nr result

ID: Coptis24_contig00031330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031330
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome a...    74   9e-12
emb|CBI39809.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_002300584.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_004171223.1| PREDICTED: proteasome activator complex subu...    71   1e-10
ref|XP_004148265.1| PREDICTED: LOW QUALITY PROTEIN: proteasome a...    71   1e-10

>ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome activator complex
           subunit 4-like [Vitis vinifera]
          Length = 1813

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/58 (63%), Positives = 41/58 (70%)
 Frame = -2

Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3
           MH+YNAWLP PV E TK EKE+F  VV +VK +W P     E  ESVY TLKWISVID
Sbjct: 1   MHLYNAWLPPPVAEATKGEKEAFGRVVAAVKEAWRP-----EDPESVYSTLKWISVID 53


>emb|CBI39809.3| unnamed protein product [Vitis vinifera]
          Length = 1808

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/58 (63%), Positives = 41/58 (70%)
 Frame = -2

Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3
           MH+YNAWLP PV E TK EKE+F  VV +VK +W P     E  ESVY TLKWISVID
Sbjct: 1   MHLYNAWLPPPVAEATKGEKEAFGRVVAAVKEAWRP-----EDPESVYSTLKWISVID 53


>ref|XP_002300584.1| predicted protein [Populus trichocarpa] gi|222847842|gb|EEE85389.1|
           predicted protein [Populus trichocarpa]
          Length = 872

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = -2

Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3
           MH+YNAWLP PV EETK+EK+SF  V+ SVK+S+ P   D     SVY TLKW+SV++
Sbjct: 1   MHLYNAWLPPPVAEETKKEKDSFRRVLNSVKDSYKPDDPD-----SVYSTLKWVSVLE 53


>ref|XP_004171223.1| PREDICTED: proteasome activator complex subunit 4-like [Cucumis
           sativus]
          Length = 909

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = -2

Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3
           MH+YNAWLP PV  ET +EKESF  VV S+K+S+ P  DD+   +SVY TLKW+SVID
Sbjct: 1   MHLYNAWLPPPVALETTKEKESFALVVNSLKDSYRP--DDL---DSVYSTLKWVSVID 53


>ref|XP_004148265.1| PREDICTED: LOW QUALITY PROTEIN: proteasome activator complex
           subunit 4-like [Cucumis sativus]
          Length = 1809

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = -2

Query: 176 MHMYNAWLPAPVGEETKREKESFTGVVKSVKNSWTPPSDDVEGHESVYHTLKWISVID 3
           MH+YNAWLP PV  ET +EKESF  VV S+K+S+ P  DD+   +SVY TLKW+SVID
Sbjct: 1   MHLYNAWLPPPVALETTKEKESFALVVNSLKDSYRP--DDL---DSVYSTLKWVSVID 53


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