BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031327
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...   344   7e-93
gb|AFP73610.1| mutS-like protein 4 [Hordeum vulgare subsp. vulgare]   342   4e-92
dbj|BAJ94106.1| predicted protein [Hordeum vulgare subsp. vulgare]    342   4e-92
ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-...   338   4e-91
ref|XP_003563107.1| PREDICTED: mutS protein homolog 4-like [Brac...   337   8e-91

>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score =  344 bits (883), Expect = 7e-93
 Identities = 171/209 (81%), Positives = 187/209 (89%)
 Frame = -1

Query: 629  LELASLNVRNKSAAAECYTRTEICLEALMDGVRKDVSVXXXXXXXXXXLDMIVNSFAHTI 450
            LELASLN RNKSAAAECYTRTE+CLE LMD +R++VSV          LDMIVNSFAH I
Sbjct: 440  LELASLNARNKSAAAECYTRTEVCLEELMDDIRENVSVLTLLAEVLCLLDMIVNSFAHMI 499

Query: 449  STKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEASNMVIVMGPNMSGK 270
            STKPVD+YTRP+FTENGPLAID+GRHPILES+H DF+ NN+FL+EASNM IVMGPNMSGK
Sbjct: 500  STKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFVANNIFLTEASNMAIVMGPNMSGK 559

Query: 269  STYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNLESNSSTFMTEMKETAFI 90
            STYLQQVCL+VILAQ+GCYVPARFS++RV DR+FTRMG  DNLESNSSTFMTEMKETAFI
Sbjct: 560  STYLQQVCLIVILAQVGCYVPARFSTVRVVDRMFTRMGAVDNLESNSSTFMTEMKETAFI 619

Query: 89   MQNVSSRSLIVMDELGRATSSSDGLAIAW 3
            MQNVS RSLIVMDELGRATSSSDG AIAW
Sbjct: 620  MQNVSQRSLIVMDELGRATSSSDGFAIAW 648


>gb|AFP73610.1| mutS-like protein 4 [Hordeum vulgare subsp. vulgare]
          Length = 720

 Score =  342 bits (876), Expect = 4e-92
 Identities = 165/208 (79%), Positives = 192/208 (92%)
 Frame = -1

Query: 626 ELASLNVRNKSAAAECYTRTEICLEALMDGVRKDVSVXXXXXXXXXXLDMIVNSFAHTIS 447
           ELASLNVRNKSAAAEC+ RTE+CLE L+  +R+D+ +          LDMIVNSFA+TIS
Sbjct: 368 ELASLNVRNKSAAAECFLRTELCLEGLISEIREDICILTLLAEVLCLLDMIVNSFAYTIS 427

Query: 446 TKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEASNMVIVMGPNMSGKS 267
           TKPVD+YTRP+FT++GP+AI+AGRHPILESLHTDF+PNN+FLSEASNMV+VMGPNMSGKS
Sbjct: 428 TKPVDRYTRPEFTDDGPMAINAGRHPILESLHTDFVPNNIFLSEASNMVLVMGPNMSGKS 487

Query: 266 TYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNLESNSSTFMTEMKETAFIM 87
           TYLQQ+CL+VILAQ+GCYVPA+F+SLRV DRIFTR+GTGDN+E+NSSTFMTEMKETAFIM
Sbjct: 488 TYLQQICLIVILAQVGCYVPAQFASLRVVDRIFTRIGTGDNVENNSSTFMTEMKETAFIM 547

Query: 86  QNVSSRSLIVMDELGRATSSSDGLAIAW 3
           QNVSSRSL+V+DELGRATSSSDGLAIAW
Sbjct: 548 QNVSSRSLVVVDELGRATSSSDGLAIAW 575


>dbj|BAJ94106.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 630

 Score =  342 bits (876), Expect = 4e-92
 Identities = 165/208 (79%), Positives = 192/208 (92%)
 Frame = -1

Query: 626 ELASLNVRNKSAAAECYTRTEICLEALMDGVRKDVSVXXXXXXXXXXLDMIVNSFAHTIS 447
           ELASLNVRNKSAAAEC+ RTE+CLE L+  +R+D+ +          LDMIVNSFA+TIS
Sbjct: 368 ELASLNVRNKSAAAECFLRTELCLEGLISEIREDICILTLLAEVLCLLDMIVNSFAYTIS 427

Query: 446 TKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEASNMVIVMGPNMSGKS 267
           TKPVD+YTRP+FT++GP+AI+AGRHPILESLHTDF+PNN+FLSEASNMV+VMGPNMSGKS
Sbjct: 428 TKPVDRYTRPEFTDDGPMAINAGRHPILESLHTDFVPNNIFLSEASNMVLVMGPNMSGKS 487

Query: 266 TYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNLESNSSTFMTEMKETAFIM 87
           TYLQQ+CL+VILAQ+GCYVPA+F+SLRV DRIFTR+GTGDN+E+NSSTFMTEMKETAFIM
Sbjct: 488 TYLQQICLIVILAQVGCYVPAQFASLRVVDRIFTRIGTGDNVENNSSTFMTEMKETAFIM 547

Query: 86  QNVSSRSLIVMDELGRATSSSDGLAIAW 3
           QNVSSRSL+V+DELGRATSSSDGLAIAW
Sbjct: 548 QNVSSRSLVVVDELGRATSSSDGLAIAW 575


>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
            sativus]
          Length = 770

 Score =  338 bits (868), Expect = 4e-91
 Identities = 167/209 (79%), Positives = 186/209 (88%)
 Frame = -1

Query: 629  LELASLNVRNKSAAAECYTRTEICLEALMDGVRKDVSVXXXXXXXXXXLDMIVNSFAHTI 450
            LELASLNVRNKSAA ECY RTEICLE L+D +R+DVS+          LDMIVNSFAHTI
Sbjct: 418  LELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTI 477

Query: 449  STKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEASNMVIVMGPNMSGK 270
            STKPVD+YTRP FTENGP+AI+A RHPILES+H DF+ N++FLSEASNM+IVMGPNMSGK
Sbjct: 478  STKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSIFLSEASNMIIVMGPNMSGK 537

Query: 269  STYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNLESNSSTFMTEMKETAFI 90
            STYLQQ+CL+VILAQIGCYVPA FS+LRV DRIFTRMGT D+LESNSSTFMTEMKETAF+
Sbjct: 538  STYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFV 597

Query: 89   MQNVSSRSLIVMDELGRATSSSDGLAIAW 3
            MQNVS RSL+V+DELGRATSSSDG AIAW
Sbjct: 598  MQNVSQRSLVVVDELGRATSSSDGFAIAW 626


>ref|XP_003563107.1| PREDICTED: mutS protein homolog 4-like [Brachypodium distachyon]
          Length = 726

 Score =  337 bits (865), Expect = 8e-91
 Identities = 162/208 (77%), Positives = 190/208 (91%)
 Frame = -1

Query: 626 ELASLNVRNKSAAAECYTRTEICLEALMDGVRKDVSVXXXXXXXXXXLDMIVNSFAHTIS 447
           ELASLN RNKSAAAEC+ RTE+CLE L+  +R+D+ +          LDMIVNSFA+TIS
Sbjct: 368 ELASLNARNKSAAAECFLRTELCLEGLISEIREDIGILTLLAEVLCLLDMIVNSFANTIS 427

Query: 446 TKPVDQYTRPKFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEASNMVIVMGPNMSGKS 267
           TKPVD+YTRP+FT++GP+AI+AGRHPILE LHTDF+PNN+FLSEASNMV+VMGPNMSGKS
Sbjct: 428 TKPVDRYTRPEFTDDGPMAINAGRHPILEGLHTDFVPNNIFLSEASNMVLVMGPNMSGKS 487

Query: 266 TYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNLESNSSTFMTEMKETAFIM 87
           TYLQQ+CL+VILAQ+GCYVPA+F+SLRV DRIFTR+GTGDN+E+NSSTFMTEMKETAFIM
Sbjct: 488 TYLQQICLIVILAQVGCYVPAQFASLRVVDRIFTRIGTGDNVENNSSTFMTEMKETAFIM 547

Query: 86  QNVSSRSLIVMDELGRATSSSDGLAIAW 3
           QNVSS+SL+V+DELGRATSSSDGLAIAW
Sbjct: 548 QNVSSKSLVVVDELGRATSSSDGLAIAW 575