BLASTX nr result

ID: Coptis24_contig00031321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031321
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275246.1| PREDICTED: uncharacterized protein LOC100241...   181   7e-44
ref|XP_002322675.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002322676.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_002335846.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_002530355.1| conserved hypothetical protein [Ricinus comm...   165   4e-39

>ref|XP_002275246.1| PREDICTED: uncharacterized protein LOC100241837 [Vitis vinifera]
           gi|147864060|emb|CAN83222.1| hypothetical protein
           VITISV_031366 [Vitis vinifera]
           gi|297739852|emb|CBI30034.3| unnamed protein product
           [Vitis vinifera]
          Length = 589

 Score =  181 bits (458), Expect = 7e-44
 Identities = 87/147 (59%), Positives = 115/147 (78%)
 Frame = +2

Query: 2   GMKLEPLRNSGENQGTRLQKKEFLLNLGFIENSDGLEKALKVIRGKGGELQGRFDCLLKA 181
           G ++ PL N GE+  ++LQK +FL +LG++EN+  +EKA K+ RGKG ELQ RFD L+KA
Sbjct: 415 GSRVGPLPNLGEDLRSQLQKTKFLSDLGYVENTKEIEKARKLFRGKGMELQERFDFLMKA 474

Query: 182 GLDSKDIIEMVKRAPEILNQTTDVLEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELR 361
           GLD KD+ EM+K AP+ILNQ+TDV+E KID+L++ L YP S LV FP YLSYT ERVELR
Sbjct: 475 GLDRKDVSEMIKVAPQILNQSTDVIEMKIDYLIHALGYPISSLVTFPSYLSYTTERVELR 534

Query: 362 FSMYSWLRDEGVKSPHLSPNTYMTCSD 442
            SMY+WL+D+GV  P+L+ +T + CSD
Sbjct: 535 MSMYNWLKDQGVAEPNLALSTIIACSD 561


>ref|XP_002322675.1| predicted protein [Populus trichocarpa] gi|222867305|gb|EEF04436.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/147 (54%), Positives = 113/147 (76%)
 Frame = +2

Query: 2   GMKLEPLRNSGENQGTRLQKKEFLLNLGFIENSDGLEKALKVIRGKGGELQGRFDCLLKA 181
           G K+E L +SGE   +++ K +F L+LGF+ENSD +++ALKV RG+G ELQ RFDCL+ A
Sbjct: 408 GSKIEWLPDSGEELRSQMLKTKFFLDLGFVENSDEMKRALKVFRGRGAELQERFDCLVIA 467

Query: 182 GLDSKDIIEMVKRAPEILNQTTDVLEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELR 361
           GLD KD+ EM+K +P+ILNQ  +V+E KIDFL+N L +P S LV FP YLSYT++R +LR
Sbjct: 468 GLDRKDVCEMIKVSPQILNQKREVIEMKIDFLINDLGFPVSSLVRFPSYLSYTMQRAKLR 527

Query: 362 FSMYSWLRDEGVKSPHLSPNTYMTCSD 442
            +MY+WL+++G  +P LS +T + C+D
Sbjct: 528 LTMYNWLKEQGKVNPMLSFSTIVGCTD 554


>ref|XP_002322676.1| predicted protein [Populus trichocarpa] gi|222867306|gb|EEF04437.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/148 (55%), Positives = 113/148 (76%)
 Frame = +2

Query: 2   GMKLEPLRNSGENQGTRLQKKEFLLNLGFIENSDGLEKALKVIRGKGGELQGRFDCLLKA 181
           G K+E L+N      +R+QK +FLL+LG +++S+ + KALKV RG G ++Q RFDC+++A
Sbjct: 395 GSKVERLQNLILK--SRMQKTKFLLDLGIVDDSNEIGKALKVFRGSGAKIQERFDCIVEA 452

Query: 182 GLDSKDIIEMVKRAPEILNQTTDVLEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELR 361
           GL  KD+ EM+K +P+ILNQT DVLE KIDFLVN + YP SYLV FP YL+YT+ERVELR
Sbjct: 453 GLSRKDVCEMIKASPQILNQTKDVLEMKIDFLVNKVGYPVSYLVTFPSYLNYTMERVELR 512

Query: 362 FSMYSWLRDEGVKSPHLSPNTYMTCSDE 445
            +MY+WL+D+G   P LS +T ++ SD+
Sbjct: 513 LAMYNWLKDQGKSVPMLSLSTVISLSDK 540


>ref|XP_002335846.1| predicted protein [Populus trichocarpa] gi|222835772|gb|EEE74207.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/148 (55%), Positives = 113/148 (76%)
 Frame = +2

Query: 2   GMKLEPLRNSGENQGTRLQKKEFLLNLGFIENSDGLEKALKVIRGKGGELQGRFDCLLKA 181
           G K+E L+N      +R+QK +FLL+LG +++S+ + KALKV RG G ++Q RFDC+++A
Sbjct: 90  GSKVERLQNLILK--SRMQKTKFLLDLGIVDDSNEIGKALKVFRGSGAKIQERFDCIVEA 147

Query: 182 GLDSKDIIEMVKRAPEILNQTTDVLEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELR 361
           GL  KD+ EM+K +P+ILNQT DVLE KIDFLVN + YP SYLV FP YL+YT+ERVELR
Sbjct: 148 GLSRKDVCEMIKASPQILNQTKDVLEMKIDFLVNKVGYPVSYLVTFPSYLNYTMERVELR 207

Query: 362 FSMYSWLRDEGVKSPHLSPNTYMTCSDE 445
            +MY+WL+D+G   P LS +T ++ SD+
Sbjct: 208 LAMYNWLKDQGKSVPMLSLSTVISLSDK 235


>ref|XP_002530355.1| conserved hypothetical protein [Ricinus communis]
           gi|223530102|gb|EEF32016.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 573

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/147 (53%), Positives = 112/147 (76%)
 Frame = +2

Query: 2   GMKLEPLRNSGENQGTRLQKKEFLLNLGFIENSDGLEKALKVIRGKGGELQGRFDCLLKA 181
           G ++E L +S E   T   K +FL+++G + N + +E+ALKV RG+G E+Q RFDC++KA
Sbjct: 402 GSRVERLPSSWEESKTL--KTKFLVDMGLVNNLNKMEQALKVFRGRGTEIQERFDCIVKA 459

Query: 182 GLDSKDIIEMVKRAPEILNQTTDVLEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELR 361
           GLD KD++EM+K +P+ILNQ  ++LE+KIDFLVNGL YPASYLV FP YL+YTI RV+LR
Sbjct: 460 GLDRKDVLEMIKTSPQILNQKKEILEKKIDFLVNGLGYPASYLVNFPSYLNYTIVRVKLR 519

Query: 362 FSMYSWLRDEGVKSPHLSPNTYMTCSD 442
            SMY+WL+++G     L+ +T + C++
Sbjct: 520 LSMYTWLKEQGTIDSKLALSTVIACAE 546


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