BLASTX nr result

ID: Coptis24_contig00031314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031314
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236748.1| uncharacterized protein LOC100305536 [Glycin...   192   4e-47
ref|XP_003525244.1| PREDICTED: dynein light chain LC6, flagellar...   190   1e-46
ref|XP_002284827.1| PREDICTED: dynein light chain, cytoplasmic-l...   189   4e-46
emb|CBI26852.3| unnamed protein product [Vitis vinifera]              189   4e-46
gb|ACU17238.1| unknown [Glycine max]                                  188   5e-46

>ref|NP_001236748.1| uncharacterized protein LOC100305536 [Glycine max]
           gi|255625837|gb|ACU13263.1| unknown [Glycine max]
          Length = 133

 Score =  192 bits (487), Expect = 4e-47
 Identities = 95/119 (79%), Positives = 105/119 (88%), Gaps = 3/119 (2%)
 Frame = -3

Query: 366 FLSSLIKKKKAVEQEEETELL---NVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSK 196
           FL SLI+KKK +EQ+E+ + L   NVRVRA DM L LQN+AF+CARD LDSMP+KKLDSK
Sbjct: 14  FLKSLIQKKKTIEQQEQHDHLQHNNVRVRACDMPLPLQNRAFRCARDLLDSMPSKKLDSK 73

Query: 195 RLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 19
           RLAL LKKEFD+SYGPAWHCIVGTSFGSYVTHS GGF+YFSIDKVYVLLFKT VEPLDH
Sbjct: 74  RLALTLKKEFDTSYGPAWHCIVGTSFGSYVTHSFGGFVYFSIDKVYVLLFKTAVEPLDH 132


>ref|XP_003525244.1| PREDICTED: dynein light chain LC6, flagellar outer arm-like
           [Glycine max]
          Length = 133

 Score =  190 bits (483), Expect = 1e-46
 Identities = 95/119 (79%), Positives = 104/119 (87%), Gaps = 3/119 (2%)
 Frame = -3

Query: 366 FLSSLIKKKKAVEQEEETELL---NVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSK 196
           FL SLI+KKK +EQ+E+ + L   NVRVRA DM L LQ++AF+CARD LDSMP KKLDSK
Sbjct: 14  FLKSLIQKKKTIEQQEQHDHLQHNNVRVRACDMPLPLQSRAFRCARDLLDSMPPKKLDSK 73

Query: 195 RLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 19
           RLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHS GGF+YFSIDKVYVLLFKT VEPLDH
Sbjct: 74  RLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFVYFSIDKVYVLLFKTAVEPLDH 132


>ref|XP_002284827.1| PREDICTED: dynein light chain, cytoplasmic-like [Vitis vinifera]
          Length = 127

 Score =  189 bits (479), Expect = 4e-46
 Identities = 96/116 (82%), Positives = 104/116 (89%)
 Frame = -3

Query: 366 FLSSLIKKKKAVEQEEETELLNVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSKRLA 187
           FLSSLI+KKKA EQ +    LNVRVRASDM L+LQ++AFKCARD+LD+MP K LDSKRLA
Sbjct: 16  FLSSLIQKKKATEQHDH---LNVRVRASDMPLALQSRAFKCARDNLDAMPGK-LDSKRLA 71

Query: 186 LALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 19
           LALKKEFDS YGPAWHCIVGTSFGSYVTHS GGFLYFSIDKVY+LLFKT VEPLDH
Sbjct: 72  LALKKEFDSLYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLDH 127


>emb|CBI26852.3| unnamed protein product [Vitis vinifera]
          Length = 125

 Score =  189 bits (479), Expect = 4e-46
 Identities = 96/116 (82%), Positives = 104/116 (89%)
 Frame = -3

Query: 366 FLSSLIKKKKAVEQEEETELLNVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSKRLA 187
           FLSSLI+KKKA EQ +    LNVRVRASDM L+LQ++AFKCARD+LD+MP K LDSKRLA
Sbjct: 14  FLSSLIQKKKATEQHDH---LNVRVRASDMPLALQSRAFKCARDNLDAMPGK-LDSKRLA 69

Query: 186 LALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 19
           LALKKEFDS YGPAWHCIVGTSFGSYVTHS GGFLYFSIDKVY+LLFKT VEPLDH
Sbjct: 70  LALKKEFDSLYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLDH 125


>gb|ACU17238.1| unknown [Glycine max]
          Length = 133

 Score =  188 bits (478), Expect = 5e-46
 Identities = 94/119 (78%), Positives = 104/119 (87%), Gaps = 3/119 (2%)
 Frame = -3

Query: 366 FLSSLIKKKKAVEQEEETELL---NVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSK 196
           FL SLI+KKK +EQ+E+ + L   NVRVRA DM L LQ++AF+CARD LDSMP KKLDSK
Sbjct: 14  FLKSLIQKKKTIEQQEQHDHLQHNNVRVRACDMPLPLQSRAFRCARDLLDSMPPKKLDSK 73

Query: 195 RLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 19
           RLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHS GGF+YFSIDKVYVLLFKT VEPL+H
Sbjct: 74  RLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFVYFSIDKVYVLLFKTAVEPLNH 132


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