BLASTX nr result

ID: Coptis24_contig00031305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031305
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...   178   5e-43
ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
emb|CBI32505.3| unnamed protein product [Vitis vinifera]              164   5e-39
ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...   164   5e-39
ref|XP_002266938.1| PREDICTED: uncharacterized membrane protein ...   147   7e-34

>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score =  178 bits (451), Expect = 5e-43
 Identities = 78/113 (69%), Positives = 100/113 (88%)
 Frame = +2

Query: 2   HSYFSVMDELLEVKEDEKRIELKISQVPGCIVAAVLGVVLDIPLITLIVIYKAPIMLFKG 181
           HSYFSVMD LL+ K++E+ IELKI+QVPGCI+AA L +++D+P+IT+IV+YKAPI+LFKG
Sbjct: 157 HSYFSVMDGLLKSKDEEEPIELKIAQVPGCILAACLAILVDVPVITIIVVYKAPILLFKG 216

Query: 182 WHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVLVGIMSSLGFGCYA 340
           WHRL++DL+GR+GPF ETVC+PFAG  I+LWP  V+LA L GI+SS GFGCYA
Sbjct: 217 WHRLIQDLIGRAGPFFETVCIPFAGFWILLWPIVVLLATLAGIVSSFGFGCYA 269


>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/113 (68%), Positives = 98/113 (86%)
 Frame = +2

Query: 2   HSYFSVMDELLEVKEDEKRIELKISQVPGCIVAAVLGVVLDIPLITLIVIYKAPIMLFKG 181
           HSYFSVMDELL  K +E  IELK++Q+PGCI+AA+LG+V+D+ +IT+IV+ KAP+ML KG
Sbjct: 157 HSYFSVMDELLASKGEEP-IELKVAQIPGCILAAILGIVVDVHVITMIVLLKAPLMLLKG 215

Query: 182 WHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVLVGIMSSLGFGCYA 340
           WHRL++DL+GR GPFLETVCVPFA L I+LWP  V+LA+  GI+SSLGFGC+A
Sbjct: 216 WHRLIQDLIGREGPFLETVCVPFASLWILLWPIMVLLAIAAGIISSLGFGCFA 268


>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/113 (67%), Positives = 95/113 (84%)
 Frame = +2

Query: 2   HSYFSVMDELLEVKEDEKRIELKISQVPGCIVAAVLGVVLDIPLITLIVIYKAPIMLFKG 181
           HSYFSVMD LLE K  EK IELK+ ++PGCI+ A+LGV++D+P ITLIV+YK+PI+LFKG
Sbjct: 158 HSYFSVMDGLLESK-GEKPIELKVFEIPGCILCAILGVLVDVPFITLIVLYKSPILLFKG 216

Query: 182 WHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVLVGIMSSLGFGCYA 340
           W++L+ DL+GR GPF ET+CVPFAGLLI+LWP  VVLA L G++SS  FGC A
Sbjct: 217 WNQLLHDLIGREGPFFETICVPFAGLLILLWPIVVVLAALAGVISSFFFGCCA 269


>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/113 (67%), Positives = 95/113 (84%)
 Frame = +2

Query: 2   HSYFSVMDELLEVKEDEKRIELKISQVPGCIVAAVLGVVLDIPLITLIVIYKAPIMLFKG 181
           HSYFSVMD LLE K  EK IELK+ ++PGCI+ A+LGV++D+P ITLIV+YK+PI+LFKG
Sbjct: 158 HSYFSVMDGLLESK-GEKPIELKVFEIPGCILCAILGVLVDVPFITLIVLYKSPILLFKG 216

Query: 182 WHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVLVGIMSSLGFGCYA 340
           W++L+ DL+GR GPF ET+CVPFAGLLI+LWP  VVLA L G++SS  FGC A
Sbjct: 217 WNQLLHDLIGREGPFFETICVPFAGLLILLWPIVVVLAALAGVISSFFFGCCA 269


>ref|XP_002266938.1| PREDICTED: uncharacterized membrane protein At3g27390 [Vitis
           vinifera] gi|296085066|emb|CBI28481.3| unnamed protein
           product [Vitis vinifera]
          Length = 585

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/114 (61%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   HSYFSVMDELLE-VKEDEKRIELKISQVPGCIVAAVLGVVLDIPLITLIVIYKAPIMLFK 178
           HSYFS MDEL E V  +EK +++K+S++P C++  VLGV LD+ LIT++ ++K+P ML K
Sbjct: 155 HSYFSYMDELREHVPPNEKPVDIKLSKLPSCLLVIVLGVPLDVLLITIVALWKSPYMLLK 214

Query: 179 GWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFAVVLAVLVGIMSSLGFGCYA 340
           GW RL+EDL+GR GPFLETVCVPFAGL I+LWP AVV+AV+  I+SSL  G YA
Sbjct: 215 GWKRLLEDLIGREGPFLETVCVPFAGLAIILWPIAVVVAVISAIISSLVLGFYA 268


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