BLASTX nr result

ID: Coptis24_contig00031288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031288
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870073.1| P-glycoprotein 9 [Arabidopsis lyrata subsp. ...   197   6e-49
ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana] gi|3784...   197   6e-49
emb|CAB78807.1| multidrug resistance protein/P-glycoprotein-like...   197   6e-49
ref|XP_002863399.1| P-GLYCOPROTEIN 7, PGP7 [Arabidopsis lyrata s...   193   1e-47
ref|XP_004155533.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   191   4e-47

>ref|XP_002870073.1| P-glycoprotein 9 [Arabidopsis lyrata subsp. lyrata]
            gi|297315909|gb|EFH46332.1| P-glycoprotein 9 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1239

 Score =  197 bits (502), Expect = 6e-49
 Identities = 102/108 (94%), Positives = 106/108 (98%)
 Frame = +2

Query: 2    AANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES 181
            AANAHNFIS LPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES
Sbjct: 1111 AANAHNFISSLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES 1170

Query: 182  ERVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
            ERVVQDALDRVMVNRTT+VVAHRL+TIK ADVIAVVK+GVIAE+GRHE
Sbjct: 1171 ERVVQDALDRVMVNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHE 1218



 Score =  154 bits (390), Expect = 6e-36
 Identities = 80/107 (74%), Positives = 90/107 (84%)
 Frame = +2

Query: 5   ANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESE 184
           ANA  FI  LPQG DT VGE G Q+SGGQKQR+AIARAILK+PKILLLDEATSALDAESE
Sbjct: 470 ANAAKFIDKLPQGLDTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESE 529

Query: 185 RVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
           R+VQDAL  +M NRTT+VVAHRL+TI+ ADVIAVV  G I E+G H+
Sbjct: 530 RIVQDALVNLMSNRTTVVVAHRLTTIRTADVIAVVHQGKIVEKGTHD 576


>ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana]
            gi|378405145|sp|Q9M0M2.2|AB9B_ARATH RecName: Full=ABC
            transporter B family member 9; Short=ABC transporter
            ABCB.9; Short=AtABCB9; AltName: Full=Multidrug resistance
            protein 9; AltName: Full=P-glycoprotein 9
            gi|332658588|gb|AEE83988.1| P-glycoprotein 9 [Arabidopsis
            thaliana]
          Length = 1236

 Score =  197 bits (502), Expect = 6e-49
 Identities = 102/108 (94%), Positives = 106/108 (98%)
 Frame = +2

Query: 2    AANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES 181
            AANAHNFIS LPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES
Sbjct: 1108 AANAHNFISSLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES 1167

Query: 182  ERVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
            ERVVQDALDRVMVNRTT+VVAHRL+TIK ADVIAVVK+GVIAE+GRHE
Sbjct: 1168 ERVVQDALDRVMVNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHE 1215



 Score =  154 bits (390), Expect = 6e-36
 Identities = 80/107 (74%), Positives = 90/107 (84%)
 Frame = +2

Query: 5   ANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESE 184
           ANA  FI  LPQG DT VGE G Q+SGGQKQR+AIARAILK+PKILLLDEATSALDAESE
Sbjct: 470 ANAAKFIDKLPQGLDTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESE 529

Query: 185 RVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
           R+VQDAL  +M NRTT+VVAHRL+TI+ ADVIAVV  G I E+G H+
Sbjct: 530 RIVQDALVNLMSNRTTVVVAHRLTTIRTADVIAVVHQGKIVEKGTHD 576


>emb|CAB78807.1| multidrug resistance protein/P-glycoprotein-like [Arabidopsis
            thaliana]
          Length = 1323

 Score =  197 bits (502), Expect = 6e-49
 Identities = 102/108 (94%), Positives = 106/108 (98%)
 Frame = +2

Query: 2    AANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES 181
            AANAHNFIS LPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES
Sbjct: 1150 AANAHNFISSLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES 1209

Query: 182  ERVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
            ERVVQDALDRVMVNRTT+VVAHRL+TIK ADVIAVVK+GVIAE+GRHE
Sbjct: 1210 ERVVQDALDRVMVNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHE 1257



 Score =  154 bits (390), Expect = 6e-36
 Identities = 80/107 (74%), Positives = 90/107 (84%)
 Frame = +2

Query: 5   ANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESE 184
           ANA  FI  LPQG DT VGE G Q+SGGQKQR+AIARAILK+PKILLLDEATSALDAESE
Sbjct: 470 ANAAKFIDKLPQGLDTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESE 529

Query: 185 RVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
           R+VQDAL  +M NRTT+VVAHRL+TI+ ADVIAVV  G I E+G H+
Sbjct: 530 RIVQDALVNLMSNRTTVVVAHRLTTIRTADVIAVVHQGKIVEKGTHD 576


>ref|XP_002863399.1| P-GLYCOPROTEIN 7, PGP7 [Arabidopsis lyrata subsp. lyrata]
            gi|297309234|gb|EFH39658.1| P-GLYCOPROTEIN 7, PGP7
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1254

 Score =  193 bits (490), Expect = 1e-47
 Identities = 100/108 (92%), Positives = 104/108 (96%)
 Frame = +2

Query: 2    AANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES 181
            AAN HNFIS LPQGY+TSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES
Sbjct: 1126 AANVHNFISSLPQGYETSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES 1185

Query: 182  ERVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
            ERVVQDALDRVMVNRTT+VVAHRL+TIK ADVIAVVK+GVIAE GRHE
Sbjct: 1186 ERVVQDALDRVMVNRTTVVVAHRLTTIKDADVIAVVKNGVIAESGRHE 1233



 Score =  154 bits (389), Expect = 7e-36
 Identities = 79/107 (73%), Positives = 93/107 (86%)
 Frame = +2

Query: 5   ANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESE 184
           ANA  FI  LPQG +T VGE G QLSGGQKQRIAIARAILK+PKILLLDEATSALDAESE
Sbjct: 472 ANASKFIDKLPQGLETMVGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESE 531

Query: 185 RVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
           R+VQDAL ++M++RTT+VVAHRL+TI+ AD+IAVV+ G I E+G H+
Sbjct: 532 RIVQDALVKLMLSRTTVVVAHRLTTIRTADMIAVVQQGKIIEKGTHD 578


>ref|XP_004155533.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
            9-like [Cucumis sativus]
          Length = 1268

 Score =  191 bits (486), Expect = 4e-47
 Identities = 97/108 (89%), Positives = 106/108 (98%)
 Frame = +2

Query: 2    AANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAES 181
            AANAHNFIS LP+GY+TSVGERGVQLSGGQKQRIAIARAILK+PKILLLDEATSALDAES
Sbjct: 1138 AANAHNFISSLPEGYETSVGERGVQLSGGQKQRIAIARAILKNPKILLLDEATSALDAES 1197

Query: 182  ERVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
            ERVVQDALDRVMVNRTT+VVAHRL+TI+GAD+IAVVK+GVIAE+G HE
Sbjct: 1198 ERVVQDALDRVMVNRTTVVVAHRLTTIRGADIIAVVKNGVIAEKGSHE 1245



 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/107 (71%), Positives = 90/107 (84%)
 Frame = +2

Query: 5   ANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESE 184
           ANA  FI  LP+G DT VGE G QLSGGQKQRIAI+RAILK+P+ILLLDEATSALD+ESE
Sbjct: 479 ANAAKFIDKLPKGLDTMVGEHGTQLSGGQKQRIAISRAILKNPRILLLDEATSALDSESE 538

Query: 185 RVVQDALDRVMVNRTTIVVAHRLSTIKGADVIAVVKSGVIAERGRHE 325
           R+VQ+AL RVM NRTT+VVAHRL+TI+ +D IAVV  G + E+G H+
Sbjct: 539 RIVQEALVRVMANRTTVVVAHRLTTIRNSDNIAVVHQGKLLEQGTHD 585


Top