BLASTX nr result

ID: Coptis24_contig00031281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031281
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277182.2| PREDICTED: cucumisin-like [Vitis vinifera]         52   1e-09
emb|CBI31591.3| unnamed protein product [Vitis vinifera]               52   1e-09
emb|CAN81645.1| hypothetical protein VITISV_010797 [Vitis vinifera]    63   3e-09
gb|AAO41911.1| putative subtilisin-like serine protease [Arabido...    50   6e-09
pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin...    50   2e-08

>ref|XP_002277182.2| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 747

 Score = 52.0 bits (123), Expect(2) = 1e-09
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -3

Query: 302 ESDTIVGILDTRIWPEARSFSDEGFGLPP 216
           ESD IVG+LDT IWPE+ SFSDEGFG PP
Sbjct: 121 ESDIIVGMLDTGIWPESASFSDEGFGPPP 149



 Score = 35.8 bits (81), Expect(2) = 1e-09
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = -1

Query: 220 PPKKWKGDCVRDSNFTCN 167
           PP KWKG C   SNFTCN
Sbjct: 148 PPTKWKGTCQTSSNFTCN 165


>emb|CBI31591.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score = 52.0 bits (123), Expect(2) = 1e-09
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -3

Query: 302 ESDTIVGILDTRIWPEARSFSDEGFGLPP 216
           ESD IVG+LDT IWPE+ SFSDEGFG PP
Sbjct: 119 ESDIIVGMLDTGIWPESASFSDEGFGPPP 147



 Score = 35.8 bits (81), Expect(2) = 1e-09
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = -1

Query: 220 PPKKWKGDCVRDSNFTCN 167
           PP KWKG C   SNFTCN
Sbjct: 146 PPTKWKGTCQTSSNFTCN 163


>emb|CAN81645.1| hypothetical protein VITISV_010797 [Vitis vinifera]
          Length = 668

 Score = 62.8 bits (151), Expect(2) = 3e-09
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = -3

Query: 338 GFRENIERVPREESDTIVGILDTRIWPEARSFSDEGFGLPPQEMER 201
           GF + ++RVP  ESD I+G+LDT IWPE++SFSDEG G  P++ ER
Sbjct: 59  GFPQTVKRVPSIESDIIIGVLDTGIWPESKSFSDEGLGPVPKKXER 104



 Score = 23.9 bits (50), Expect(2) = 3e-09
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -1

Query: 379 FPSRKYQLHTTRSRD 335
           FPS   QLHTTRS D
Sbjct: 42  FPSGILQLHTTRSWD 56


>gb|AAO41911.1| putative subtilisin-like serine protease [Arabidopsis thaliana]
          Length = 708

 Score = 49.7 bits (117), Expect(2) = 6e-09
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = -3

Query: 329 ENIERVPREESDTIVGILDTRIWPEARSFSDEGFGLPPQE 210
           E +  V   +SDTI+G+ D  IWPE+ SFSD+GFG PP++
Sbjct: 99  EGVVSVFPNKSDTIIGVFDGGIWPESESFSDKGFGPPPKK 138



 Score = 35.8 bits (81), Expect(2) = 6e-09
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = -1

Query: 220 PPKKWKGDCVRDSNFTCN 167
           PPKKWKG C    NFTCN
Sbjct: 135 PPKKWKGICAGGKNFTCN 152


>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like
           Endoprotease From Cucumis Melo L gi|400260662|pdb|3VTA|B
           Chain B, Crystal Structure Of Cucumisin, A
           Subtilisin-Like Endoprotease From Cucumis Melo L
          Length = 621

 Score = 49.7 bits (117), Expect(2) = 2e-08
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = -3

Query: 338 GFRENIERVPREESDTIVGILDTRIWPEARSFSDEGFGLPP 216
           GF   + R  + ES+ +VG+LDT IWPE+ SF DEGF  PP
Sbjct: 9   GFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPP 49



 Score = 34.3 bits (77), Expect(2) = 2e-08
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -1

Query: 220 PPKKWKGDCVRDSNFTCNR 164
           PP KWKG C   +NF CNR
Sbjct: 48  PPPKWKGTCETSNNFRCNR 66


Top