BLASTX nr result
ID: Coptis24_contig00031276
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00031276
(619 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN82937.1| hypothetical protein VITISV_039222 [Vitis vinifera] 53 2e-16
emb|CAN68990.1| hypothetical protein VITISV_015170 [Vitis vinifera] 52 4e-16
emb|CAN74194.1| hypothetical protein VITISV_040578 [Vitis vinifera] 50 5e-16
ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251... 47 1e-14
emb|CAN73624.1| hypothetical protein VITISV_042460 [Vitis vinifera] 47 1e-14
>emb|CAN82937.1| hypothetical protein VITISV_039222 [Vitis vinifera]
Length = 1193
Score = 52.8 bits (125), Expect(3) = 2e-16
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 4 FMFLKSAKEIWDALKQTYSQEGNFAKLYDLEQELLDIRQGDLSIIAYYKPY 156
F+ +AK+IWDA K+TYS N ++L+ +E L D RQG+ S+ YY +
Sbjct: 283 FLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVTQYYNTF 333
Score = 40.4 bits (93), Expect(3) = 2e-16
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 353 EDSRRSAMRVREETHDRSAFSSSTTQKTPSGSKRFGDDKQPYKSQRPKCDHCGRNGHTCE 532
E+SR+ M +E + +S+ ++ + S G D+Q K RP CD+C + GH E
Sbjct: 403 EESRKKVMMGSKEQPAPTLDASALATRSFNSS---GGDRQ--KRDRPWCDYCKKPGHYKE 457
Query: 533 GCWDLH 550
CW LH
Sbjct: 458 TCWKLH 463
Score = 37.4 bits (85), Expect(3) = 2e-16
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +3
Query: 165 WQ--DHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQP-KTLAEV 335
WQ D ++ ++ C++D A+ E+ R+F+F GLN + R +I+ +P +L E
Sbjct: 337 WQQLDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMGIKPLPSLREA 396
Query: 336 YSYIQ 350
+S ++
Sbjct: 397 FSEVR 401
>emb|CAN68990.1| hypothetical protein VITISV_015170 [Vitis vinifera]
Length = 1285
Score = 52.0 bits (123), Expect(3) = 4e-16
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1
Query: 4 FMFLKSAKEIWDALKQTYSQEGNFAKLYDLEQELLDIRQGDLSIIAYY 147
F+ +AKEIWDA K+TYS N +L+++E L D RQG+L++ Y+
Sbjct: 85 FLLYGTAKEIWDAAKETYSNNENTLELFEVESVLHDFRQGELTVTQYF 132
Score = 40.4 bits (93), Expect(3) = 4e-16
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = +2
Query: 383 REETHDRSAFSSSTTQKTPSGS------KRFGDDKQPYKSQRPKCDHCGRNGHTCEGCWD 544
REE+ + S + P S F ++ K RP CDHC R GHT + CW
Sbjct: 204 REESRKKIMMGSQDSVTNPESSALAVRGNPFNNNDHKPKKGRPWCDHCRRXGHTKDTCWK 263
Query: 545 L 547
+
Sbjct: 264 I 264
Score = 37.4 bits (85), Expect(3) = 4e-16
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 153 LRSKWQ--DHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQP-KT 323
L WQ D ++++N C D ER RI++F+ GLN + + R +IL +P
Sbjct: 135 LNRYWQQLDLFEEHNWSCLGDGIKYKQIIERKRIYKFLIGLNKNLDEVRGRILGSKPLLN 194
Query: 324 LAEVYSYIQ 350
+ E +S ++
Sbjct: 195 IREAFSEVR 203
>emb|CAN74194.1| hypothetical protein VITISV_040578 [Vitis vinifera]
Length = 1353
Score = 50.4 bits (119), Expect(3) = 5e-16
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +1
Query: 4 FMFLKSAKEIWDALKQTYSQEGNFAKLYDLEQELLDIRQGDLSIIAYY 147
FM+ +AKEIWDA ++TYS N + +++++ L D+RQGD ++ Y+
Sbjct: 104 FMYYGTAKEIWDAARETYSNIDNTSAIFEIKSILQDLRQGDSTVTEYF 151
Score = 42.0 bits (97), Expect(3) = 5e-16
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +2
Query: 353 EDSRRSAMRVREETHDRSAFSSSTTQKTPSGSKRFGDDKQPYKSQRPKCDHCGRNGHTCE 532
E+SR+ M + + S+ + T S + + K RP CDHC + GHT E
Sbjct: 224 EESRQKVMLGTQNSSKNLENSALVARGTQSNN-----NXHQTKKNRPWCDHCRKPGHTKE 278
Query: 533 GCWDLH 550
CW LH
Sbjct: 279 TCWHLH 284
Score = 37.0 bits (84), Expect(3) = 5e-16
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +3
Query: 165 WQ--DHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQP-KTLAEV 335
WQ D Y++ C ED E+ RI++F+ GLN + + R ++L +P ++ EV
Sbjct: 158 WQQLDIYEELVWKCPEDGLLYKKVIEKERIYKFLLGLNKNLDEVRGRVLSIKPLPSVREV 217
Query: 336 YSYIQ 350
+S I+
Sbjct: 218 FSEIR 222
>ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251634 [Vitis vinifera]
Length = 2816
Score = 46.6 bits (109), Expect(3) = 1e-14
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = +1
Query: 4 FMFLKSAKEIWDALKQTYSQEGNFAKLYDLEQELLDIRQGDLSIIAYY 147
F+ +AKEIWD K+T+S + N +++ +E L D+RQG+L++ Y+
Sbjct: 2156 FLSFDTAKEIWDTAKETFSDKENTSEIIQIEGILHDLRQGNLTVTEYF 2203
Score = 46.6 bits (109), Expect(3) = 1e-14
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 353 EDSRRSAMRVREETHDRSAFSSSTTQKTPSGSKRFGDDKQPYKSQRPKCDHCGRNGHTCE 532
E+SR++ M + + + S+ TQ P D++Q K RP CDHC + GH+ E
Sbjct: 2276 EESRKNLMMGSHQQLNMAESSALKTQFAPF------DNRQKIKGGRPWCDHCRKPGHSRE 2329
Query: 533 GCWDLH 550
CW +H
Sbjct: 2330 TCWKIH 2335
Score = 31.6 bits (70), Expect(3) = 1e-14
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 171 DHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQP-KTLAEVYSYI 347
D ++ +N C D E R+F+F+ GLN + + R +I+ +P +L E +S +
Sbjct: 2214 DTFEVHNWNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIMGVKPLPSLREAFSEV 2273
Query: 348 Q 350
+
Sbjct: 2274 R 2274
>emb|CAN73624.1| hypothetical protein VITISV_042460 [Vitis vinifera]
Length = 1287
Score = 47.4 bits (111), Expect(3) = 1e-14
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 353 EDSRRSAMRVREETHDRSAFSSSTTQKTPSGSKRFGDDKQPYKSQRPKCDHCGRNGHTCE 532
E+SR++ M + + + S+ TQ P D++Q K RP CDHC + GH+ E
Sbjct: 229 EESRKNLMMGSHQQLNMAESSALKTQFAPF------DNRQKIKGGRPWCDHCXKXGHSRE 282
Query: 533 GCWDLH 550
CW +H
Sbjct: 283 TCWKIH 288
Score = 46.6 bits (109), Expect(3) = 1e-14
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = +1
Query: 4 FMFLKSAKEIWDALKQTYSQEGNFAKLYDLEQELLDIRQGDLSIIAYY 147
F+ +AKEIWD K+T+S + N +++ +E L D+RQG+L++ Y+
Sbjct: 109 FLSFDTAKEIWDTAKETFSDKENTSEIIQIEGILHDLRQGNLTVTEYF 156
Score = 30.8 bits (68), Expect(3) = 1e-14
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 171 DHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQP-KTLAEVYSYI 347
D ++ +N C + E R+F+F+ GLN + + R +I+ +P +L E +S +
Sbjct: 167 DTFEVHNWNCVTBGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIMGVKPLPSLREAFSEV 226
Query: 348 Q 350
+
Sbjct: 227 R 227