BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031275
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29513.3| unnamed protein product [Vitis vinifera]              134   8e-30
emb|CBI37346.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   132   3e-29
emb|CBI31781.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27

>emb|CBI29513.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  134 bits (337), Expect = 8e-30
 Identities = 76/145 (52%), Positives = 95/145 (65%), Gaps = 9/145 (6%)
 Frame = -2

Query: 409 YLICVVEKGVGIMIKN---VVWKVDLM*GL---GLSTGDVVYGEFNDNVMRMALEGVVLS 248
           YL+CVVEKG+ +       V    D+  G+    +STGDVV+GEFNDN MR  LE V+LS
Sbjct: 244 YLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVKVSTGDVVHGEFNDNFMRAGLEAVILS 303

Query: 247 LCPPEVLLGEPLSKQTEKMLLSYAGPTSSVRVEHASRGCSKDSDALAEVLLLYETMGGDS 68
           + P E+LLG PLSKQTEK+LL+YAGP S+VRVE  SR C  D  ALAEV+ LYE +  DS
Sbjct: 304 MSPAELLLGYPLSKQTEKLLLAYAGPASNVRVERTSRDCFSDGGALAEVMSLYENLSEDS 363

Query: 67  SINAQEHDIDNT---VQDKHLLGVE 2
                +H +DNT    Q+ H L +E
Sbjct: 364 ---RADHQVDNTEVMEQENHCLAIE 385


>emb|CBI37346.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score =  133 bits (334), Expect = 2e-29
 Identities = 74/145 (51%), Positives = 96/145 (66%), Gaps = 9/145 (6%)
 Frame = -2

Query: 409 YLICVVEKGVGIMIKN---VVWKVDLM*GL---GLSTGDVVYGEFNDNVMRMALEGVVLS 248
           YL+CVVEKG+ +       V    D+  G+    +STGDVV+G+FNDN MR  LE V+LS
Sbjct: 242 YLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGKFNDNFMRAGLEAVILS 301

Query: 247 LCPPEVLLGEPLSKQTEKMLLSYAGPTSSVRVEHASRGCSKDSDALAEVLLLYETMGGDS 68
           + P E+LLG PLSKQTEK+LL+YAGP S+VR+E  SR C  D  ALAEV+ LYE +  DS
Sbjct: 302 MSPAELLLGYPLSKQTEKLLLAYAGPASNVRLERTSRDCFSDGGALAEVMSLYENLSEDS 361

Query: 67  SINAQEHDIDNT---VQDKHLLGVE 2
            +   +H +DNT    Q+ H L +E
Sbjct: 362 RV---DHQVDNTEVMEQENHCLAIE 383


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  132 bits (332), Expect = 3e-29
 Identities = 75/145 (51%), Positives = 95/145 (65%), Gaps = 9/145 (6%)
 Frame = -2

Query: 409 YLICVVEKGVGIMIKN---VVWKVDLM*GL---GLSTGDVVYGEFNDNVMRMALEGVVLS 248
           YL+CVVEKG+ +       V    D+  G+    +STGDVV+GEFNDN MR  LE V+LS
Sbjct: 242 YLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGEFNDNFMRAGLEAVILS 301

Query: 247 LCPPEVLLGEPLSKQTEKMLLSYAGPTSSVRVEHASRGCSKDSDALAEVLLLYETMGGDS 68
           + P E+LLG PLSKQTEK+LL+YAGP S+VRVE  SR C  D  ALAEV+ LYE +  +S
Sbjct: 302 MSPAELLLGYPLSKQTEKLLLAYAGPASNVRVERTSRDCFSDGGALAEVMSLYENLSENS 361

Query: 67  SINAQEHDIDNT---VQDKHLLGVE 2
                +H +DNT    Q+ H L +E
Sbjct: 362 ---RADHQVDNTEVMEQENHCLAIE 383


>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score =  132 bits (332), Expect = 3e-29
 Identities = 75/145 (51%), Positives = 95/145 (65%), Gaps = 9/145 (6%)
 Frame = -2

Query: 409 YLICVVEKGVGIMIKN---VVWKVDLM*GL---GLSTGDVVYGEFNDNVMRMALEGVVLS 248
           YL+CVVEKG+ +       V    D+  G+    +STGDVV+GEFNDN MR  LE V+LS
Sbjct: 110 YLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGEFNDNFMRAGLEAVILS 169

Query: 247 LCPPEVLLGEPLSKQTEKMLLSYAGPTSSVRVEHASRGCSKDSDALAEVLLLYETMGGDS 68
           + P E+LLG PLSKQTEK+LL+YAGP S+VRVE  SR C  D  ALAEV+ LYE +  +S
Sbjct: 170 MSPAELLLGYPLSKQTEKLLLAYAGPASNVRVERTSRDCFSDGGALAEVMSLYENLSENS 229

Query: 67  SINAQEHDIDNT---VQDKHLLGVE 2
                +H +DNT    Q+ H L +E
Sbjct: 230 ---RADHQVDNTEVMEQENHCLAIE 251


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
           predicted protein [Populus trichocarpa]
          Length = 1092

 Score =  126 bits (317), Expect = 2e-27
 Identities = 70/137 (51%), Positives = 92/137 (67%), Gaps = 1/137 (0%)
 Frame = -2

Query: 409 YLICVVEKGVGIMIKNVVWKVDL-M*GLGLSTGDVVYGEFNDNVMRMALEGVVLSLCPPE 233
           YL CVVEKG+   ++  V+ V + +  + +STGDVVYGEFND  MR  LE  VLSL P E
Sbjct: 222 YLCCVVEKGLDCGVEGGVFDVRVGVVAVEISTGDVVYGEFNDGFMRSGLEAFVLSLAPAE 281

Query: 232 VLLGEPLSKQTEKMLLSYAGPTSSVRVEHASRGCSKDSDALAEVLLLYETMGGDSSINAQ 53
           +LLG+PLSKQTEK+LL+Y+GP+S+VRVE  SR C  D  ALA+V+ LYE M  D+  + +
Sbjct: 282 LLLGDPLSKQTEKLLLAYSGPSSNVRVERVSRDCFSDGGALADVMSLYENMIEDNLGDNE 341

Query: 52  EHDIDNTVQDKHLLGVE 2
           +   D   Q    L +E
Sbjct: 342 KQMTDAKEQGSCHLAIE 358