BLASTX nr result

ID: Coptis24_contig00031262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031262
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
emb|CBI16176.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat...   111   7e-23
ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat...   109   2e-22
ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase fa...    99   5e-19

>ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|222845629|gb|EEE83176.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/114 (47%), Positives = 83/114 (72%)
 Frame = +3

Query: 6   LSFAILIHSLVNSNLYWPASSIAHSFIYNNNGLNVKELFELMFIAFNKCGFGYESSSGFD 185
           +SF ILIH+LVN+NL+WPASS+  + +    GL+ +E+FE +   F KC F   SS GFD
Sbjct: 106 MSFCILIHALVNANLFWPASSLLQTLLLRG-GLDPREVFEALLDCFEKCDF--ISSLGFD 162

Query: 186 VLVQTFVLNKQVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVF 347
           +L+Q++V  K++F++V + + MR C L+P+VR++  VLNGL ++RR +MVL +F
Sbjct: 163 LLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLF 216


>emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/113 (46%), Positives = 80/113 (70%)
 Frame = +3

Query: 9   SFAILIHSLVNSNLYWPASSIAHSFIYNNNGLNVKELFELMFIAFNKCGFGYESSSGFDV 188
           SF ILIH+LV SNLYWPASS+  + +    GLN + LFE    ++ KC F   ++ GFD+
Sbjct: 95  SFCILIHALVQSNLYWPASSLLQTLLLR--GLNPEGLFESFLDSYRKCNFS--TTLGFDL 150

Query: 189 LVQTFVLNKQVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVF 347
           L+QT+V N++  + + VV+ M  CG++P++R++S VLNGL+R+R+F M L +F
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLF 203


>ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/113 (46%), Positives = 80/113 (70%)
 Frame = +3

Query: 9   SFAILIHSLVNSNLYWPASSIAHSFIYNNNGLNVKELFELMFIAFNKCGFGYESSSGFDV 188
           SF ILIH+LV SNLYWPASS+  + +    GLN + LFE    ++ KC F   ++ GFD+
Sbjct: 95  SFCILIHALVQSNLYWPASSLLQTLLLR--GLNPEGLFESFLDSYRKCNFS--TTLGFDL 150

Query: 189 LVQTFVLNKQVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVF 347
           L+QT+V N++  + + VV+ M  CG++P++R++S VLNGL+R+R+F M L +F
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLF 203


>ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
           gi|449501214|ref|XP_004161309.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/113 (48%), Positives = 80/113 (70%)
 Frame = +3

Query: 9   SFAILIHSLVNSNLYWPASSIAHSFIYNNNGLNVKELFELMFIAFNKCGFGYESSSGFDV 188
           SF ILIHSL+ +NL+WPASS+  + +    GLN  ++FE  F ++ K  + + SSSGFD+
Sbjct: 105 SFCILIHSLLQNNLFWPASSLLQTLLLR--GLNPHQIFENFFESYKK--YKFSSSSGFDM 160

Query: 189 LVQTFVLNKQVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVF 347
           L+Q +V NK+V + V VV  MR  GL+PEVR++S +LN L R+R+F  VL++F
Sbjct: 161 LIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELF 213


>ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
           gi|355508324|gb|AES89466.1|
           UDP-glucoronosyl/UDP-glucosyl transferase family
           protein-like protein [Medicago truncatula]
          Length = 970

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/113 (44%), Positives = 79/113 (69%)
 Frame = +3

Query: 9   SFAILIHSLVNSNLYWPASSIAHSFIYNNNGLNVKELFELMFIAFNKCGFGYESSSGFDV 188
           SFAIL+H+LV + L+WPA+S+ H+ +    G + K +FE    +  +C F   S+ GFD 
Sbjct: 98  SFAILVHALVQNKLFWPANSLLHTLLLR--GSDPKFVFEKFLESHKQCKFS--STLGFDF 153

Query: 189 LVQTFVLNKQVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVF 347
           LV +++ N +VF+AV V++ M G  L+PEVR++S +LNGL+R+R+F +V +VF
Sbjct: 154 LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVF 206