BLASTX nr result

ID: Coptis24_contig00031258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031258
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22959.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002272681.1| PREDICTED: uncharacterized protein LOC100244...    79   4e-13
gb|ACJ83881.1| unknown [Medicago truncatula]                           78   7e-13
ref|XP_003550411.1| PREDICTED: uncharacterized protein LOC100810...    74   1e-11
emb|CAN69222.1| hypothetical protein VITISV_012018 [Vitis vinifera]    74   2e-11

>emb|CBI22959.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
 Frame = -1

Query: 346 WNYDGCGGSEWE-----FSDPAFDFVYEMICWIVMSNCLHFALKKICRILFAADGEFVDS 182
           WN+D  GG  W+      SDPAFDFVYE+ICWI +SNC+HFA K++ RI FA D    D+
Sbjct: 120 WNFDRFGGHNWDESPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRI-FADD--IGDA 176

Query: 181 AREKGPLRLVSI 146
           +REK P R  S+
Sbjct: 177 SREKVPFRFASM 188


>ref|XP_002272681.1| PREDICTED: uncharacterized protein LOC100244847 [Vitis vinifera]
          Length = 226

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
 Frame = -1

Query: 346 WNYDGCGGSEWE-----FSDPAFDFVYEMICWIVMSNCLHFALKKICRILFAADGEFVDS 182
           WN+D  GG  W+      SDPAFDFVYE+ICWI +SNC+HFA K++ RI FA D    D+
Sbjct: 157 WNFDRFGGHNWDESPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRI-FADD--IGDA 213

Query: 181 AREKGPLRLVSI 146
           +REK P R  S+
Sbjct: 214 SREKVPFRFASM 225


>gb|ACJ83881.1| unknown [Medicago truncatula]
          Length = 179

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
 Frame = -1

Query: 346 WNYDGCG-GSEWE-----FSDPAFDFVYEMICWIVMSNCLHFALKKICRILFAADGEFVD 185
           WN++  G G  W+       DPAFDFVY ++ WI++SNCLHFA+KKI RI+  ADG  VD
Sbjct: 108 WNFNRFGEGENWDEHSSSLQDPAFDFVYRVLSWIMLSNCLHFAVKKIVRII--ADGSIVD 165

Query: 184 SAREKGPLRLVSI 146
           S REK P RL  I
Sbjct: 166 SDREKVPARLAPI 178


>ref|XP_003550411.1| PREDICTED: uncharacterized protein LOC100810316 [Glycine max]
          Length = 185

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
 Frame = -1

Query: 346 WNYDGCGG-SEWE-----FSDPAFDFVYEMICWIVMSNCLHFALKKICRILFAADGEFVD 185
           WN++  GG + W+       DPAFDFVY+++ WI++SNCLHF+ K+I RI+  A G  VD
Sbjct: 114 WNFNRFGGGNNWDEPSSSVPDPAFDFVYQVLSWIMLSNCLHFSFKRIVRIV--AAGSIVD 171

Query: 184 SAREKGPLRLVSI 146
           S REK P RLV I
Sbjct: 172 SDREKVPARLVPI 184


>emb|CAN69222.1| hypothetical protein VITISV_012018 [Vitis vinifera]
          Length = 347

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
 Frame = -1

Query: 346 WNYDGCGGSEWE-----FSDPAFDFVYEMICWIVMSNCLHFALKKICRILFAADGEFVDS 182
           WN+D  GG  W+      SDPAFDFVYE+ICWI +SNC+HFA K++ RI FA D    D+
Sbjct: 157 WNFDRFGGHNWDESPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRI-FADD--IGDA 213

Query: 181 AREK 170
           +REK
Sbjct: 214 SREK 217


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