BLASTX nr result

ID: Coptis24_contig00031251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031251
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524795.1| conserved hypothetical protein [Ricinus comm...   200   1e-49
ref|NP_182327.6| uncharacterized protein [Arabidopsis thaliana] ...   192   3e-47
ref|XP_002321052.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
ref|XP_003632363.1| PREDICTED: uncharacterized protein LOC100254...   182   2e-44
emb|CAN77825.1| hypothetical protein VITISV_015458 [Vitis vinifera]   182   2e-44

>ref|XP_002524795.1| conserved hypothetical protein [Ricinus communis]
           gi|223535979|gb|EEF37638.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2254

 Score =  200 bits (508), Expect = 1e-49
 Identities = 97/121 (80%), Positives = 109/121 (90%)
 Frame = +3

Query: 9   SSWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKAGLNKSVILSVYAS 188
           SSWDFL IA+L CF AIHNHG EMLFSFSAIVQHTP PPVGFSILKAGLNKSV+LSVYAS
Sbjct: 395 SSWDFLEIALLACFCAIHNHGFEMLFSFSAIVQHTPSPPVGFSILKAGLNKSVLLSVYAS 454

Query: 189 PTARQSQFDNFSHERRIATFLNTIGQKFLSVYRACGTYIAFLTILIAVYLVTPNYVSFGY 368
           PTA+ S  D+ S+E RIA FL+ +GQKFLS+YR+CGTYIAFLTIL+AVYLVTPNY+SFGY
Sbjct: 455 PTAKYSH-DHHSYESRIAAFLSAVGQKFLSMYRSCGTYIAFLTILLAVYLVTPNYISFGY 513

Query: 369 L 371
           +
Sbjct: 514 I 514


>ref|NP_182327.6| uncharacterized protein [Arabidopsis thaliana]
           gi|330255833|gb|AEC10927.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 2462

 Score =  192 bits (487), Expect = 3e-47
 Identities = 92/121 (76%), Positives = 109/121 (90%)
 Frame = +3

Query: 9   SSWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKAGLNKSVILSVYAS 188
           SSWDFL IA+L CF AIHNHG E+LFSFSAIV+HTP PP+GFSILKAGLNKSV+LSVY+S
Sbjct: 547 SSWDFLEIALLACFCAIHNHGFEVLFSFSAIVRHTPSPPIGFSILKAGLNKSVLLSVYSS 606

Query: 189 PTARQSQFDNFSHERRIATFLNTIGQKFLSVYRACGTYIAFLTILIAVYLVTPNYVSFGY 368
           P++  SQ DN ++ER IA+FL+ IGQKFLS+YR+CGTYIAF+TILI+VYLV PNYVSFGY
Sbjct: 607 PSSSYSQ-DNTTYERHIASFLSAIGQKFLSMYRSCGTYIAFITILISVYLVKPNYVSFGY 665

Query: 369 L 371
           +
Sbjct: 666 I 666


>ref|XP_002321052.1| predicted protein [Populus trichocarpa] gi|222861825|gb|EEE99367.1|
           predicted protein [Populus trichocarpa]
          Length = 1752

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/121 (76%), Positives = 103/121 (85%)
 Frame = +3

Query: 9   SSWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKAGLNKSVILSVYAS 188
           SSWDFL+IA+L CF AIHNHG EMLFSFSAIVQHTP PP+GFSILKAGLNKSV+LSVYAS
Sbjct: 148 SSWDFLKIALLACFCAIHNHGFEMLFSFSAIVQHTPSPPIGFSILKAGLNKSVLLSVYAS 207

Query: 189 PTARQSQFDNFSHERRIATFLNTIGQKFLSVYRACGTYIAFLTILIAVYLVTPNYVSFGY 368
            T R    DN S+E RIA FL  IGQKFL+ YR+CGTYIAFLTIL+ VYLV PNY+SFGY
Sbjct: 208 STTRYGH-DNSSYESRIALFLGAIGQKFLTTYRSCGTYIAFLTILLTVYLVKPNYISFGY 266

Query: 369 L 371
           +
Sbjct: 267 I 267


>ref|XP_003632363.1| PREDICTED: uncharacterized protein LOC100254568 [Vitis vinifera]
          Length = 2489

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/120 (71%), Positives = 104/120 (86%)
 Frame = +3

Query: 12  SWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKAGLNKSVILSVYASP 191
           SWD L IA+L C  A+H HG ++LFSFSA+VQHTP PP+GFSILKAGLNKSV+LS+Y+S 
Sbjct: 573 SWDSLEIAMLACCCAVHKHGFDVLFSFSAMVQHTPNPPIGFSILKAGLNKSVLLSIYSSS 632

Query: 192 TARQSQFDNFSHERRIATFLNTIGQKFLSVYRACGTYIAFLTILIAVYLVTPNYVSFGYL 371
           T R    DN SHERRIA+FL+ IGQ+FLS+YR+CGTYIAF+TIL+AVYLVTPNY+SFGY+
Sbjct: 633 TTRDCN-DNRSHERRIASFLSAIGQQFLSMYRSCGTYIAFMTILLAVYLVTPNYISFGYI 691


>emb|CAN77825.1| hypothetical protein VITISV_015458 [Vitis vinifera]
          Length = 2393

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/120 (71%), Positives = 104/120 (86%)
 Frame = +3

Query: 12  SWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKAGLNKSVILSVYASP 191
           SWD L IA+L C  A+H HG ++LFSFSA+VQHTP PP+GFSILKAGLNKSV+LS+Y+S 
Sbjct: 485 SWDSLEIAMLACCCAVHKHGFDVLFSFSAMVQHTPNPPIGFSILKAGLNKSVLLSIYSSS 544

Query: 192 TARQSQFDNFSHERRIATFLNTIGQKFLSVYRACGTYIAFLTILIAVYLVTPNYVSFGYL 371
           T R    DN SHERRIA+FL+ IGQ+FLS+YR+CGTYIAF+TIL+AVYLVTPNY+SFGY+
Sbjct: 545 TTRDCN-DNRSHERRIASFLSAIGQQFLSMYRSCGTYIAFMTILLAVYLVTPNYISFGYI 603


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