BLASTX nr result

ID: Coptis24_contig00031237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031237
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93168.1| unknown [Populus trichocarpa]                          342   1e-91
ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|2...   336   5e-90
ref|XP_002271441.1| PREDICTED: random slug protein 5 [Vitis vini...   328   1e-87
ref|XP_002284696.1| PREDICTED: random slug protein 5 [Vitis vini...   326   7e-87
ref|XP_002512674.1| aspartate semialdehyde dehydrogenase, putati...   325   9e-87

>gb|ABK93168.1| unknown [Populus trichocarpa]
          Length = 255

 Score =  342 bits (877), Expect = 1e-91
 Identities = 165/255 (64%), Positives = 203/255 (79%), Gaps = 1/255 (0%)
 Frame = -1

Query: 1069 EMLNTKE-NGGETKEDNRMKNCNEIEQQELRVMRSFVESQNPASKEVDDVMLRRFLRARD 893
            E  N +E NG  T+E+      NEIEQ+++R+MR+FVE ++P+ KEVDD+M+RRFLRAR+
Sbjct: 2    EFSNIEESNGIITEEEENGTEINEIEQRKVRLMRAFVEREDPSVKEVDDLMIRRFLRARE 61

Query: 892  LDVKTASALFLKYLSWRQEYVPKGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGKMH 713
            LD++ AS LFLKYLSWR+  +P G IS S+IPNELAQ K+F+QG+DKQ RPI VV G  H
Sbjct: 62   LDIEKASTLFLKYLSWRRSIIPNGFISSSEIPNELAQNKLFMQGFDKQNRPIVVVFGAGH 121

Query: 712  IPNKRTGGLDEFKRFVVYIHDKVCARMLRGQEKFIVIADLRGWGYSNCDIRAYIGALSIL 533
             P K  G L+EFKRFV Y  D++CARM  GQEKF+ IADL GWGY+N DIR Y+ ALSIL
Sbjct: 122  KPYK--GSLEEFKRFVAYTLDRICARMPAGQEKFVSIADLEGWGYTNSDIRGYLAALSIL 179

Query: 532  QDCYPERLGKVLLLHVPYIFMTTWKIVYPFIDSNTRNKIVFVENKNLTSTLLQEIDRSQL 353
            QDC+PERLGK+ ++HVPYIFMT WK+VYPFIDS T+ KI+FVENK L STLL +ID SQL
Sbjct: 180  QDCFPERLGKLFIVHVPYIFMTAWKVVYPFIDSKTKKKIIFVENKKLRSTLLGDIDESQL 239

Query: 352  PDIYGGNLPLVPIED 308
            PD+YGG L LVPI+D
Sbjct: 240  PDVYGGKLSLVPIQD 254


>ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|222846613|gb|EEE84160.1|
            predicted protein [Populus trichocarpa]
          Length = 231

 Score =  336 bits (862), Expect = 5e-90
 Identities = 158/233 (67%), Positives = 193/233 (82%)
 Frame = -1

Query: 1006 NEIEQQELRVMRSFVESQNPASKEVDDVMLRRFLRARDLDVKTASALFLKYLSWRQEYVP 827
            NEIEQ+++R+MR+FVE ++P+ KEVDD+M+RRFLRAR+LD++ AS LFLKYLSWR+  +P
Sbjct: 1    NEIEQRKVRLMRAFVEREDPSVKEVDDLMIRRFLRARELDIEKASTLFLKYLSWRRSIIP 60

Query: 826  KGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGKMHIPNKRTGGLDEFKRFVVYIHDK 647
             G IS S+IPNELAQ K+F+QG+DKQ RPI VV G  H P K  G L+EFKRFV Y  D+
Sbjct: 61   NGFISSSEIPNELAQNKLFMQGFDKQNRPIVVVFGAGHKPYK--GSLEEFKRFVAYTLDR 118

Query: 646  VCARMLRGQEKFIVIADLRGWGYSNCDIRAYIGALSILQDCYPERLGKVLLLHVPYIFMT 467
            +CARM  GQEKF+ IADL GWGY+N DIR Y+ ALSILQDC+PERLGK+ ++HVPYIFMT
Sbjct: 119  ICARMPAGQEKFVSIADLEGWGYTNSDIRGYLAALSILQDCFPERLGKLFIVHVPYIFMT 178

Query: 466  TWKIVYPFIDSNTRNKIVFVENKNLTSTLLQEIDRSQLPDIYGGNLPLVPIED 308
             WK+VYPFIDS T+ KI+FVENK L STLL +ID SQLPD+YGG L LVPI+D
Sbjct: 179  AWKVVYPFIDSKTKKKIIFVENKKLRSTLLGDIDESQLPDVYGGKLSLVPIQD 231


>ref|XP_002271441.1| PREDICTED: random slug protein 5 [Vitis vinifera]
            gi|296085533|emb|CBI29265.3| unnamed protein product
            [Vitis vinifera]
          Length = 246

 Score =  328 bits (842), Expect = 1e-87
 Identities = 156/234 (66%), Positives = 193/234 (82%)
 Frame = -1

Query: 1006 NEIEQQELRVMRSFVESQNPASKEVDDVMLRRFLRARDLDVKTASALFLKYLSWRQEYVP 827
            NEIE++++ +MR+ VES +P+SK++DD M+RRFLRARDLD+  ASAL LKYL WR+ ++P
Sbjct: 15   NEIEKRKVGLMRARVESADPSSKDLDDFMIRRFLRARDLDIDKASALLLKYLGWRRAFMP 74

Query: 826  KGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGKMHIPNKRTGGLDEFKRFVVYIHDK 647
             G IS S+IPNELAQ K+F+QG DK+ RPI VV G  H P K  G L+EFKRFVVY  +K
Sbjct: 75   NGYISASEIPNELAQNKLFMQGQDKKGRPITVVYGARHKPYK--GNLEEFKRFVVYSLEK 132

Query: 646  VCARMLRGQEKFIVIADLRGWGYSNCDIRAYIGALSILQDCYPERLGKVLLLHVPYIFMT 467
            +CA M  G+EKFI IAD+ GWGY+N DIRAY+ ALSILQDCYPERLGK+ L+HVPY+FMT
Sbjct: 133  ICASMPGGEEKFISIADIEGWGYTNSDIRAYLAALSILQDCYPERLGKLFLVHVPYVFMT 192

Query: 466  TWKIVYPFIDSNTRNKIVFVENKNLTSTLLQEIDRSQLPDIYGGNLPLVPIEDS 305
             WK+VYPFIDS T+ KI+FVENKN+ STLL +ID +QLPD+YGG LPLVPI+DS
Sbjct: 193  AWKVVYPFIDSKTKKKIIFVENKNIKSTLLGDIDENQLPDVYGGKLPLVPIQDS 246


>ref|XP_002284696.1| PREDICTED: random slug protein 5 [Vitis vinifera]
            gi|147860850|emb|CAN83160.1| hypothetical protein
            VITISV_022555 [Vitis vinifera]
            gi|297734520|emb|CBI15767.3| unnamed protein product
            [Vitis vinifera]
          Length = 256

 Score =  326 bits (835), Expect = 7e-87
 Identities = 161/250 (64%), Positives = 193/250 (77%), Gaps = 5/250 (2%)
 Frame = -1

Query: 1039 ETKEDNRMKNCNEIEQQELRVMRSFVESQNPASKE-----VDDVMLRRFLRARDLDVKTA 875
            E ++       NE+EQ ++ +MR++VESQ+P+S++      DD+M+RRFLRARDLDV+ A
Sbjct: 9    EARDGEGSMKINEMEQTKVSLMRTYVESQDPSSRDPSSQKADDLMIRRFLRARDLDVEKA 68

Query: 874  SALFLKYLSWRQEYVPKGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGKMHIPNKRT 695
            SALFL+YL WRQ +VP GSIS S + NE+AQ KMFLQG DKQ RPI+VVLG  H   +  
Sbjct: 69   SALFLRYLKWRQTFVPNGSISLSQVRNEVAQNKMFLQGLDKQGRPISVVLGAKHFQYQ-- 126

Query: 694  GGLDEFKRFVVYIHDKVCARMLRGQEKFIVIADLRGWGYSNCDIRAYIGALSILQDCYPE 515
            G LDEFKRF+VY  DK+C RM  GQEKF+VI DL GWGYSN D+RAY+GALSILQD YPE
Sbjct: 127  GSLDEFKRFLVYAFDKICTRMPPGQEKFVVIGDLEGWGYSNSDMRAYLGALSILQDYYPE 186

Query: 514  RLGKVLLLHVPYIFMTTWKIVYPFIDSNTRNKIVFVENKNLTSTLLQEIDRSQLPDIYGG 335
            RLGK+ ++H PYIFM  WKIVYPFID NT+ KIV VE   L STLL+EID SQLP IYGG
Sbjct: 187  RLGKLFIIHAPYIFMAIWKIVYPFIDKNTKKKIVLVEKTKLRSTLLEEIDESQLPQIYGG 246

Query: 334  NLPLVPIEDS 305
             LPLVPI+DS
Sbjct: 247  KLPLVPIQDS 256


>ref|XP_002512674.1| aspartate semialdehyde dehydrogenase, putative [Ricinus communis]
            gi|223548635|gb|EEF50126.1| aspartate semialdehyde
            dehydrogenase, putative [Ricinus communis]
          Length = 257

 Score =  325 bits (834), Expect = 9e-87
 Identities = 156/258 (60%), Positives = 196/258 (75%), Gaps = 3/258 (1%)
 Frame = -1

Query: 1069 EMLNTKENGGETKEDNRM---KNCNEIEQQELRVMRSFVESQNPASKEVDDVMLRRFLRA 899
            E  N  E  G TK D+        NEIEQQ++ +MR  VE ++P++KEVDD+M+RRFLRA
Sbjct: 2    ESSNGHEANGATKHDHENGEESKSNEIEQQKVHIMRVHVEREDPSAKEVDDLMIRRFLRA 61

Query: 898  RDLDVKTASALFLKYLSWRQEYVPKGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGK 719
            R+ D++ AS L LKYLSWR+ ++P GS+  S+IP ELAQ K+F+QG DK+  PI VV G 
Sbjct: 62   REHDIEKASNLLLKYLSWRRSFIPNGSVYPSEIPKELAQNKLFMQGVDKKNHPIVVVFGA 121

Query: 718  MHIPNKRTGGLDEFKRFVVYIHDKVCARMLRGQEKFIVIADLRGWGYSNCDIRAYIGALS 539
             H P K  G L+EFKRFV +  D++CARM  GQEKF+ IAD+ GWGY+N DIR Y+ ALS
Sbjct: 122  KHKPYK--GNLEEFKRFVAFTLDRICARMPDGQEKFVAIADIEGWGYTNSDIRGYLAALS 179

Query: 538  ILQDCYPERLGKVLLLHVPYIFMTTWKIVYPFIDSNTRNKIVFVENKNLTSTLLQEIDRS 359
            ILQD YPERL K+ ++HVPYIFMT WK++YPFIDS T+ KI+FVENK L+STLL +ID S
Sbjct: 180  ILQDYYPERLAKLFIVHVPYIFMTAWKVIYPFIDSKTKKKIIFVENKKLSSTLLVDIDES 239

Query: 358  QLPDIYGGNLPLVPIEDS 305
            QLPD+YGG LPLVPI+DS
Sbjct: 240  QLPDVYGGRLPLVPIQDS 257


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