BLASTX nr result

ID: Coptis24_contig00031219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031219
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334118.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_003593110.1| Zinc finger MYM-type protein [Medicago trunc...    59   3e-07
ref|XP_003600098.1| Zinc finger MYM-type protein [Medicago trunc...    59   5e-07
ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago trunc...    59   5e-07
dbj|BAA36225.1| transposase [Ipomoea purpurea]                         58   7e-07

>ref|XP_002334118.1| predicted protein [Populus trichocarpa] gi|222869621|gb|EEF06752.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = -2

Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9
           ERAFS++K VK  LRNKM + FLAD M +YIERE VE++D D I+DEF
Sbjct: 64  ERAFSAMKHVKTVLRNKMEEEFLADSMMIYIERELVEDIDSDSIIDEF 111


>ref|XP_003593110.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355482158|gb|AES63361.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 787

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = -2

Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9
           ER+FS++K++K  LRNKM D FLAD M +YIE+E V++   D I+DEF
Sbjct: 730 ERSFSTMKLIKTRLRNKMEDEFLADGMMLYIEKEIVDQFSTDSIIDEF 777


>ref|XP_003600098.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355489146|gb|AES70349.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 795

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = -2

Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9
           ER+FS++K++K  LRNKM D FLAD M +YIE+E  ++   D I+DEF
Sbjct: 738 ERSFSTMKLIKTRLRNKMEDEFLADSMMLYIEKEIADQFSTDSIIDEF 785


>ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355482174|gb|AES63377.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 754

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = -2

Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9
           ER+FS++K++K  LRNKM D FLAD M +YIE+E  ++   D I+DEF
Sbjct: 697 ERSFSAMKLIKTRLRNKMEDEFLADSMMLYIEKEIADQFSTDSIIDEF 744


>dbj|BAA36225.1| transposase [Ipomoea purpurea]
          Length = 808

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)
 Frame = -2

Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9
           ER+FS++ IVK  LRNKM D FL+DC+ VYIE++  ++  +D I+D F
Sbjct: 751 ERSFSAMNIVKTTLRNKMEDEFLSDCLLVYIEKQIAKQFSIDSIIDAF 798


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