BLASTX nr result
ID: Coptis24_contig00031219
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031219 (294 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002334118.1| predicted protein [Populus trichocarpa] gi|2... 65 8e-09 ref|XP_003593110.1| Zinc finger MYM-type protein [Medicago trunc... 59 3e-07 ref|XP_003600098.1| Zinc finger MYM-type protein [Medicago trunc... 59 5e-07 ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago trunc... 59 5e-07 dbj|BAA36225.1| transposase [Ipomoea purpurea] 58 7e-07 >ref|XP_002334118.1| predicted protein [Populus trichocarpa] gi|222869621|gb|EEF06752.1| predicted protein [Populus trichocarpa] Length = 121 Score = 64.7 bits (156), Expect = 8e-09 Identities = 31/48 (64%), Positives = 38/48 (79%) Frame = -2 Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9 ERAFS++K VK LRNKM + FLAD M +YIERE VE++D D I+DEF Sbjct: 64 ERAFSAMKHVKTVLRNKMEEEFLADSMMIYIERELVEDIDSDSIIDEF 111 >ref|XP_003593110.1| Zinc finger MYM-type protein [Medicago truncatula] gi|355482158|gb|AES63361.1| Zinc finger MYM-type protein [Medicago truncatula] Length = 787 Score = 59.3 bits (142), Expect = 3e-07 Identities = 27/48 (56%), Positives = 37/48 (77%) Frame = -2 Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9 ER+FS++K++K LRNKM D FLAD M +YIE+E V++ D I+DEF Sbjct: 730 ERSFSTMKLIKTRLRNKMEDEFLADGMMLYIEKEIVDQFSTDSIIDEF 777 >ref|XP_003600098.1| Zinc finger MYM-type protein [Medicago truncatula] gi|355489146|gb|AES70349.1| Zinc finger MYM-type protein [Medicago truncatula] Length = 795 Score = 58.5 bits (140), Expect = 5e-07 Identities = 26/48 (54%), Positives = 36/48 (75%) Frame = -2 Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9 ER+FS++K++K LRNKM D FLAD M +YIE+E ++ D I+DEF Sbjct: 738 ERSFSTMKLIKTRLRNKMEDEFLADSMMLYIEKEIADQFSTDSIIDEF 785 >ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago truncatula] gi|355482174|gb|AES63377.1| Zinc finger MYM-type protein [Medicago truncatula] Length = 754 Score = 58.5 bits (140), Expect = 5e-07 Identities = 26/48 (54%), Positives = 36/48 (75%) Frame = -2 Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9 ER+FS++K++K LRNKM D FLAD M +YIE+E ++ D I+DEF Sbjct: 697 ERSFSAMKLIKTRLRNKMEDEFLADSMMLYIEKEIADQFSTDSIIDEF 744 >dbj|BAA36225.1| transposase [Ipomoea purpurea] Length = 808 Score = 58.2 bits (139), Expect = 7e-07 Identities = 25/48 (52%), Positives = 36/48 (75%) Frame = -2 Query: 152 ERAFSSIKIVKIWLRNKMGDVFLADCMTVYIEREFVEEVDLDGIVDEF 9 ER+FS++ IVK LRNKM D FL+DC+ VYIE++ ++ +D I+D F Sbjct: 751 ERSFSAMNIVKTTLRNKMEDEFLSDCLLVYIEKQIAKQFSIDSIIDAF 798